Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g1013 ATGGCAAGTGCTTCACTGTACACTTTACTTCTGTTATCTTCCCTTCTCTTGGCTTCCCATTTCTATGCCTCAGAGGCACAAGCCAAGCCCCCTATAGTGAAGGGGCTGTCCTGGAATTTCTTTGACTCGAGCTGTCCCCAGCTTGAGGTTATAGTTAGGAACCATCTGAGGAGGGTGCTCAGGAGGGACGTTGGCCAAGCTGCTGGAATCCTTCGTATCTTCTTCCACGATTGCTTCGTTCAAGGATGCGATGGGTCGGTGTTGTTGGATGCAGTACCACCAGAGACTGAAAGCGAGAAGGATACACCACCAAACGTGACCTTAAGGCCAGAGGCCTTGAAGACCATTGACGACCTTCGAGCTCTTGTTCAGAGGAAGTGCGGAAAGATTGTCTCTTGTGCTGACATTACCGTCCTCGCCGCACGTGATTCTGTTTTCTTGACAGGAGGCCCAGACTTCGACGTGCCACTTGGAAGAAGGGACAGCCTAACCTTCGACGTGAGCGGAACAAATAACCTTCCAGGACCATTCAACGACGCGGACGGAATCCTCAGCGCTCTGGGAGAACAAAACTTCGACACCACCGACGTTGTCGCCCTCTCCGGGGCGCACACATTCGGGCGAGCCCACTGCAGCGCCTTCTTCAACCGCCTCTCCCCCACCGACCCCACCATGGACCCCGCCCTTGCCGCTTCTCTCAAGGCCACTTGCCCCTCCGCTGACTCCTCCAACACCGCCATGCTCGACGTCCGAACCCCCAACCTCTTCGACAACAAATACTACATCGACCTCATGAACCGCCAGGGCGTCTTCACCTCCGACCAGGACCTGTTCACTAATCCTAAGACGAAGGGGCTCGTGACCAACTTTGCCGGAAACCAGACATTGTTCTTCGAGAAGTTCGCGAATGCCATCGTGAAGATGAGTCAGTTGAGGGTGTTGACCGGAGTTCAGGGAGAGATTCGGGGTAAGTGCTCGGCCACCAATGGAAATGCCAAGTCATCTTTGTTGTCGTCTGTGGTGGATGACATGGAGGAGTTGACTCAGTTTTAA 1053 0.5413 MASASLYTLLLLSSLLLASHFYASEAQAKPPIVKGLSWNFFDSSCPQLEVIVRNHLRRVLRRDVGQAAGILRIFFHDCFVQGCDGSVLLDAVPPETESEKDTPPNVTLRPEALKTIDDLRALVQRKCGKIVSCADITVLAARDSVFLTGGPDFDVPLGRRDSLTFDVSGTNNLPGPFNDADGILSALGEQNFDTTDVVALSGAHTFGRAHCSAFFNRLSPTDPTMDPALAASLKATCPSADSSNTAMLDVRTPNLFDNKYYIDLMNRQGVFTSDQDLFTNPKTKGLVTNFAGNQTLFFEKFANAIVKMSQLRVLTGVQGEIRGKCSATNGNAKSSLLSSVVDDMEELTQF 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g1013 350 ProSiteProfiles Plant heme peroxidase family profile. 35 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PANTHER - 14 329 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Haem peroxidase superfamily signature 67 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Haem peroxidase superfamily signature 131 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Haem peroxidase superfamily signature 249 264 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Haem peroxidase superfamily signature 149 161 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 FunFam Peroxidase 174 308 - -
Glsi12g1013 350 ProSitePatterns Peroxidases active site signature. 67 78 IPR019794 GO:0004601
Glsi12g1013 350 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Glsi12g1013 350 FunFam Peroxidase 39 182 - -
Glsi12g1013 350 Pfam Peroxidase 52 292 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 130 140 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 263 280 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 111 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 45 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 247 262 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 69 89 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 PRINTS Plant peroxidase signature 149 164 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 Gene3D Peroxidase, domain 2 175 309 - -
Glsi12g1013 350 SUPERFAMILY Heme-dependent peroxidases 31 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g1013 350 Gene3D - 39 326 - -
Glsi12g1013 350 CDD secretory_peroxidase 35 328 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g1013 Glsi-ChrGlsi12 27936386 27938888 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g1013 3 343 Peroxidase AT1G71695 53.868 1.27e-131 378