Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0987 ATGACTCTCCTTACAGATGCATTCACGATTAAAATGACGACTACTCAAAAAGATACGGATAAGTTCTTCATGTCCATCAGTGAAGGAGAGAAAAAGCCATTTGACTTTTTACGTTTTGTATATGATGGGTGCATTGCTGGAGGTATTGCTGGTGTTGTTGTAGAAACAGCTTTATATCCAATTGATACCATAAAAACTCGATTACAGGCTGCCCGTGGTGGAGGGAAAATAATTTTGAAGGGTCTATATTCTGGATTGGCTGGAAATCTTGCCGGTGTCTTACCAGCTTCTGCGATCTTTGTTGGTGTATATGAGCCCACAAAGCATAAACTGCTAGCATCATTCCCTGAAAATCTCAGCGCTTTGGCTCATCTTGCTGCTGGTGCTATTGGAGGTGCTGCTTCTTCTCTTGTTCGTGTTCCAACTGAGGTTGTTAAGCAAAGGATGCAAACTGGACAATTTAGTTCAGCCCCTGCTGCTGTCCGTCTTATTGTTGCCAAGGAGGGGTTTAAAGGTCTTTATGCGGGATATGGATCCTTCTTATTGCGAGATTTGCCTTTTGATGCCATACAATTTTGCATTTATGAGCAGCTTCGGATAGGGTATAAACTAGCGGCACAAAGAGATCTGAAGGATCCAGAGAATGCAATGCTTGGTGCTTTTGCTGGTGCTGTAACCGGAGCAGTTACAACTCCTCTTGATGTAGTAAAAACCAGATTGATGGTTCAGGGATCACAAAACCAGTACAAAGGTATTTGTGATTGCGTGAGGACGATAATTAAAGAAGAGGGAACTCATGCTCTTTTCAAGGGTATGGGACCTAGAGTTTTATGGATAGGCATTGGAGGTTCAATTTTCTTTGGTGTTCTTGAGAAGACAAAGCAAGTTCTCGCTCAGAGACACGCACAAAATGAGGCAGAGAAGCCAATTTCTTCTAGTCCAAATTGA 948 0.4241 MTLLTDAFTIKMTTTQKDTDKFFMSISEGEKKPFDFLRFVYDGCIAGGIAGVVVETALYPIDTIKTRLQAARGGGKIILKGLYSGLAGNLAGVLPASAIFVGVYEPTKHKLLASFPENLSALAHLAAGAIGGAASSLVRVPTEVVKQRMQTGQFSSAPAAVRLIVAKEGFKGLYAGYGSFLLRDLPFDAIQFCIYEQLRIGYKLAAQRDLKDPENAMLGAFAGAVTGAVTTPLDVVKTRLMVQGSQNQYKGICDCVRTIIKEEGTHALFKGMGPRVLWIGIGGSIFFGVLEKTKQVLAQRHAQNEAEKPISSSPN 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0987 315 Gene3D Mitochondrial carrier domain 36 311 IPR023395 -
Glsi12g0987 315 PRINTS Mitochondrial carrier protein signature 219 241 IPR002067 GO:0055085
Glsi12g0987 315 PRINTS Mitochondrial carrier protein signature 174 192 IPR002067 GO:0055085
Glsi12g0987 315 PRINTS Mitochondrial carrier protein signature 43 56 IPR002067 GO:0055085
Glsi12g0987 315 PRINTS Mitochondrial carrier protein signature 56 70 IPR002067 GO:0055085
Glsi12g0987 315 SUPERFAMILY Mitochondrial carrier 44 291 IPR023395 -
Glsi12g0987 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 37 110 IPR018108 -
Glsi12g0987 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 296 IPR018108 -
Glsi12g0987 315 FunFam S-adenosylmethionine carrier 1 chloroplastic/mitochondrial 42 308 - -
Glsi12g0987 315 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 24 307 - -
Glsi12g0987 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 201 IPR018108 -
Glsi12g0987 315 Pfam Mitochondrial carrier protein 42 74 IPR018108 -
Glsi12g0987 315 Pfam Mitochondrial carrier protein 119 199 IPR018108 -
Glsi12g0987 315 Pfam Mitochondrial carrier protein 214 299 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0987 Glsi-ChrGlsi12 27682772 27688578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0987 117 299 Chloroplast and Mitochondria Gene Families AT1G07030 30.526 1.43e-16 77.4