Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0967 ATGGGAAGTGTGAAGGAATGGTTCAGGTCATCGCAGGCTCTATTAAGCATGTTATTAGTGCAAGTTTTGGCAACTGGGATGCAGCTGTTTTCAAGAGTCATATTGGTTGAGGGCACTTTCATTTTTGCACTCATTGCCTATCGCCATGTTGTTGCTACTATTTGTGTTGCCCCTTTTGCTTTCTACTTTGAAAGAAGCCGCGTAAAGAACTTGAGTTGGTCGGTTTGGTTCTGGCTCTTCATCAATGCTTTACTTGGGATAATATTGGCTATGGGATTGTTCTATTATGGTCTGCGAGACACCTCGGCTACATACTCAACCAACTTCCTCAACTTGATTCCTATATTCACCTTTTTTGTCTCCATCATATTCAGGATGGAGAAACTGGGTTTGCAAACATGGGCTGGTAAAGCCAAGACTCTGGGGCCAATTTTGTGTGTTGGGGGAGCAGTAACTACTAGTCTTTACAAGGGCAAGGAATTCCATATTGGTCATCATAGTAATCACGTTCAAACTACTGCTGAGACACCCCAGACTAACATGCTTCGAGGCACCCTTTTTCTAGTTGGAAGCTGCTTGTCATATGCCACATGGTACATTGTGCAAGCCAAGTTGCTGAAAGCATATCCATTAAAGTATTGCGTAACGATGCTATCTTGTATAATAGCATCAATTCAAGCAGCAGTGATAGGCTTAAGCATAGATAATAGTAAAGCTGCTTGGACTTTAGGTTGGAATCTGCAGCTGGTCACTATAATTTACTCGGGAGCACTGGCCACGGCTGCTACTTTCTGTTTGTTATCTTGGGCAATTGCAGTCAAAGGACCTACTTATCCCTCAATGTTCAATCCGCTGGCTCTTATTTTTGTGGCCATGTTAGAAGCTATTTTACTGGGCGAACCACTCAGAGTTGGAAGCTTGCTGGGCATGATTTTGATCATCCTTGGCTTATACTCCTTTCTGTGGGGTAAAAGTACGGATACACAAAACTTGCCTCAACCAAATGTAGCGACTGGTGTAGTATCCACAGGCATGGCTGCTGAGTCTGCTGGGCTGCAATCAACGACTAAAATAATGCCAAGTTCTTCACCTAACAATGCAGTTATTGAAATTGAAAGGACAGACATAACCAGCAGAAAAGACTGA 1146 0.4311 MGSVKEWFRSSQALLSMLLVQVLATGMQLFSRVILVEGTFIFALIAYRHVVATICVAPFAFYFERSRVKNLSWSVWFWLFINALLGIILAMGLFYYGLRDTSATYSTNFLNLIPIFTFFVSIIFRMEKLGLQTWAGKAKTLGPILCVGGAVTTSLYKGKEFHIGHHSNHVQTTAETPQTNMLRGTLFLVGSCLSYATWYIVQAKLLKAYPLKYCVTMLSCIIASIQAAVIGLSIDNSKAAWTLGWNLQLVTIIYSGALATAATFCLLSWAIAVKGPTYPSMFNPLALIFVAMLEAILLGEPLRVGSLLGMILIILGLYSFLWGKSTDTQNLPQPNVATGVVSTGMAAESAGLQSTTKIMPSSSPNNAVIEIERTDITSRKD 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0967 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 47 141 - -
Glsi12g0967 381 Pfam EamA-like transporter family 183 320 IPR000620 GO:0016020
Glsi12g0967 381 Pfam EamA-like transporter family 14 136 IPR000620 GO:0016020
Glsi12g0967 381 PANTHER WAT1-RELATED PROTEIN 14 328 IPR030184 GO:0016020|GO:0022857
Glsi12g0967 381 SUPERFAMILY Multidrug resistance efflux transporter EmrE 245 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0967 Glsi-ChrGlsi12 27528077 27530985 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0967 1 375 Nodulin-like Gene Family AT5G07050 29.793 4.28e-65 211