Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0939 ATGGCTACTAAGCAGAATCATACTGAGCCTTCTTCTCTTCATGTTGAACCCGCCGCTCATGCTTCTCTGCCGGAACCAAGCCCACTCCGGAAGATCATTGTCGTCGCCTCCATTGCCGCGGGAATTCAGTTCGGTTGGGGTATTCAGCTTGCGTTGTTAACTCCATATGTGCAGCATCTGGGTATTCCTCATGCTTGGGCTTCTTTCATTTGGCTCTGTGGACCAATTTCGGGTATGATAGTCCAACCACTCGTCGGTTACCACAGTGACCGATGCACCTCCCGCTTCGGCCGGCGCCGCCCTTTCATTGCTGGCGGGTATCTCTCGGTCTTCATCGCCGTTTTCCTCATTGGTTACTGCGCGGACATGGGTCACATGTTCGGTGACTCGCTGGAGAAAAAGACCCGGCCGCGAGCCTTTGCCATCTTCGTCCTCGGGTTCTGGATCATCGACGTGGCGAACAACATGCTTCAAGGGCCGTGCCGGGCTCTCCTCGCCGACCTCGCCGCTGGCGACAACCGCAAGACCCGAACCGCCAACGCTTTCTTCTCATTCTTCATGGCGTTTGGAAACATCCTCAGCTACGCTGCTGGATCTTCCAGCAAAATCTATAAAATATTCCCGTTTACTAAAACCAAAGCCTGCGACGTTGACTGCGCGAATCTCAAGACCTGCTGCTTCCTCTCCATCACTTTGCTGACGATTGTCGCGGTGGCGGCTCTGACCTACGTGAAGGAGAAACCGCTGCCGTCTCAGAAGGGAGATGTCAATGGCGGCGAAAACGGGGAGGAAAGGGAGGGTACGGCGGGTGCAGGGGGTTTACCGTGTTTTGGGCAAATGTTGGATGCTTTTCGGGAGCTGAAGAGGCCGATGTGGATCCTTCTGTTGGTGACGTGTCTCAACTGGATTGCGTGGTTCCCTTTCTTGATCTACAACACTGATTGGATGGGGAGGGACGTGTACGGAGGAAAGGTTAACCATGGGAAGGCGTACTATAAGGGCGTGCACGCGGGTTCATTGGGGCTCATGCTGAACTCGGTGGTGCAGGGGGCGGTGTCGCTGGGAATGGAGGTGTTGGCCCGTGTGGTCGGTGGGGTCAAGAGGCTATGGGGAATCGTGAACTTCTTGTTGGCCACGTGTCTCACATTGACGGTGTTAATCACCAAGATGGCGGAGCATTCGCGGCAGTTCCCCGCCGGCTCCTCTGACCCACTGCCTCCTCCGGCGGCAGTGAAGGGTAGCGCGTTGGCTCTGTACGCGGTGCTGGGAATTCCCCTTTCTATTACTTTCAGTATCCCTTTTGCTCTGGCATCAATATTCTCCAGCAACGCTGGGGCAGGCCAAGGGTTATCTTTGGGAGTTCTCAATCTTGCAATTGTAGTACCACAGATGGTGGTGGCGGCGGTAAGTGGAAAATGGGATGGCTTGTTCGGTGGTGGTAACTTGCCGGCATTCGTGGTGGGTGCCATTGCAGCTGCAGCCAGCGGATTATTATCGATCATTTTGCTGCCGTCACCACCACCGGACATGGCTAAGGCGGTAACGGCGACCGCAGGAGGCTTCCATTAG 1569 0.5545 MATKQNHTEPSSLHVEPAAHASLPEPSPLRKIIVVASIAAGIQFGWGIQLALLTPYVQHLGIPHAWASFIWLCGPISGMIVQPLVGYHSDRCTSRFGRRRPFIAGGYLSVFIAVFLIGYCADMGHMFGDSLEKKTRPRAFAIFVLGFWIIDVANNMLQGPCRALLADLAAGDNRKTRTANAFFSFFMAFGNILSYAAGSSSKIYKIFPFTKTKACDVDCANLKTCCFLSITLLTIVAVAALTYVKEKPLPSQKGDVNGGENGEEREGTAGAGGLPCFGQMLDAFRELKRPMWILLLVTCLNWIAWFPFLIYNTDWMGRDVYGGKVNHGKAYYKGVHAGSLGLMLNSVVQGAVSLGMEVLARVVGGVKRLWGIVNFLLATCLTLTVLITKMAEHSRQFPAGSSDPLPPPAAVKGSALALYAVLGIPLSITFSIPFALASIFSSNAGAGQGLSLGVLNLAIVVPQMVVAAVSGKWDGLFGGGNLPAFVVGAIAAAASGLLSIILLPSPPPDMAKAVTATAGGFH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0939 522 PANTHER SUGAR TRANSPORTER 29 502 - -
Glsi12g0939 522 CDD MFS_SLC45_SUC 32 498 - -
Glsi12g0939 522 NCBIfam sucrose/proton symporter 28 508 IPR005989 GO:0005886|GO:0008515|GO:0015770
Glsi12g0939 522 Gene3D MFS general substrate transporter like domains 29 252 IPR036259 -
Glsi12g0939 522 SUPERFAMILY MFS general substrate transporter 30 508 IPR036259 -
Glsi12g0939 522 Pfam MFS/sugar transport protein 44 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0939 Glsi-ChrGlsi12 27137959 27140873 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0939 22 522 Sucrose Transporter Gene Family AT1G22710 64.300 0.0 643