Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0938 ATGGCTACTAAACAGGATCCTACTAAGCCTTCTTCTCTTCAGGTTGAACCTCCTGCTCATGCTGCCCCGCAGGAACCAAGCCCACTCAGGAAGATCATTGTTGTCGCCTCCATTGCTGCCGGAATTCAGTTCGGTTGGGCTCTTCAGCTCTCCTTGTTAACTCCATATGTGCAGCTTCTTGGTATTCCTCATACTTGGGCTGCTTTCATTTGGCTTTGTGGACCCATTTCGGGTATGCTAGTCCAGCCAGTCGTTGGTTACCATAGTGACCGATGCACCTCCCGCTTTGGCCGGCGCCGCCCTTTTATTGCTGCTGGGTCTTTCTCCGTCGCCATCGCCGTTTTTCTCATCGGGTATGCCGCCGACATGGGACACATGTTAGGCGACTCACTGGAGGAAAAGATCCGGCCGCGCGCCATCGCCATCTTCGTCGTCGGGTTCTGGATCCTCGACGTGGCGAACAACATGCTTCAAGGGCCTTGCCGGGCTCTCCTCGGTGACCTCGCCGGCGGCGACCATCGAAAGACCCGAAATGCCAACGCCTTCTTCTCGTTCTTTATGGCGATCGGAAATGTCCTCGGCTACGCCGCCGGATCTTACAGCAAACTCCATAACGTATTCCCGTTCACTAAAACCAAAGCCTGCGACGTTTACTGCGCGAATCTCAAGAGCTGTTTCTTCCTCTCCATCGCCTTGCTGACGATTCTCGCGACGGCGGCTCTTATCTACGTGAAGGAGAAAACGCTGCCGTCTCAGAAGGTAGATGCGAATGGCGGCGGAAACGAGGACGAAATGGAGGGTACGACGCCTACGGGGGGATTACCGTGTTTCGGGCAAATTTTCGGTGCTTTTCGGGAACTGAAGAAGCCTATGTGGATCCTTCTGTTGGTGACGTGTCTCAATTGGATTGCGTGGTTTCCTTTCCTGTTGTTCGACACCGATTGGATGGGGAGGGAGGTGTACGGAGGAAAGGTCGGAGAAGGGAAGGCGTATGATCGGGGCGTGCGCGTCGGTGCATTGGGGCTCATGCTGAACTCAGTCGTGCTCGGGGTGGTGTCGCTGGGGGTAGAGGTGTTGGCGCGTGTGGTCGGTGGGGTCAAGAGGTTATGGGGAATTGTAAACTTCTTGCTGGCGGTGTGTCTCGCAATGACGGTGTTGGTCACCAAGATGGCGGAGCATTCGCGGCACTTCCCCCCCGGTTCCTCCGACCCACTGCCGCCGGACACGGCAGTGAAGAGTGGCGCGTTGGCTCTGTTCGCAGTGCTGGGAATTCCCCTCGCGATTACTTACAGTATCCCTTTTGCTCTAGCATCGATATTCTCCAGCACCTCAGGCGCAGGCCAAGGCTTGTCTTTGGGAGTTCTCAATCTTGCAATTGTTGTCCCACAGATGGTAGTGTCTGTGCTAAGTGGACCATGGGATGCTTTGTTCGGTGGTGGTAACTTGCCGGCGTTCGTGGTGGGTGCCGTGGCAGCTGCAGCCAGCGGAATATTATCGATCATCATGCTTCCGTCGCCGCCGCCGGAGATGGCCAAGGCGATAAATACCTCGGGAGGCTTCCATTAG 1566 0.5587 MATKQDPTKPSSLQVEPPAHAAPQEPSPLRKIIVVASIAAGIQFGWALQLSLLTPYVQLLGIPHTWAAFIWLCGPISGMLVQPVVGYHSDRCTSRFGRRRPFIAAGSFSVAIAVFLIGYAADMGHMLGDSLEEKIRPRAIAIFVVGFWILDVANNMLQGPCRALLGDLAGGDHRKTRNANAFFSFFMAIGNVLGYAAGSYSKLHNVFPFTKTKACDVYCANLKSCFFLSIALLTILATAALIYVKEKTLPSQKVDANGGGNEDEMEGTTPTGGLPCFGQIFGAFRELKKPMWILLLVTCLNWIAWFPFLLFDTDWMGREVYGGKVGEGKAYDRGVRVGALGLMLNSVVLGVVSLGVEVLARVVGGVKRLWGIVNFLLAVCLAMTVLVTKMAEHSRHFPPGSSDPLPPDTAVKSGALALFAVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVVPQMVVSVLSGPWDALFGGGNLPAFVVGAVAAAASGILSIIMLPSPPPEMAKAINTSGGFH 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0938 521 PANTHER SUGAR TRANSPORTER 29 502 - -
Glsi12g0938 521 NCBIfam sucrose/proton symporter 28 507 IPR005989 GO:0005886|GO:0008515|GO:0015770
Glsi12g0938 521 CDD MFS_SLC45_SUC 32 482 - -
Glsi12g0938 521 Gene3D MFS general substrate transporter like domains 25 505 IPR036259 -
Glsi12g0938 521 FunFam Sucrose transport protein 26 503 - -
Glsi12g0938 521 Pfam MFS/sugar transport protein 41 260 - -
Glsi12g0938 521 SUPERFAMILY MFS general substrate transporter 30 509 IPR036259 -
Glsi12g0938 521 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0938 Glsi-ChrGlsi12 27108029 27110278 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0938 24 521 Sucrose Transporter Gene Family AT1G22710 67.659 0.0 677