Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0932 ATGGAAGATCCAGAGGAAGAGGAGCTTCTTAATCTTAGCCTCTCCGTTTCTTCAGGTAGGGAGAGGAAAAAGAAAGGAAAGACAATCACAAGGAATCATCATCATCATCATGATCCTAATTATTCTATGAGTCCTATGGATTATTCCTATCATGATCAAGAAGGGTATGAAGGGAAGATCTTTAGGCTGCTCCAAATGAGGGACCAAATGCTAAGGCAAGAACACAATAGAAGAAAAGGAGTAATGGTTGAAAGTGATGGAGGCAATAATGGCCTGCCTTTAATCCATTTGCTTCTCACAACAGCAACTTCTATTGATGAGAACAACTTGGGCTCATCCCTAGACGCTCTCACAGAGCTCTACCAAACTGTGTCCCTAACTGGAGACTCAGTTCAACGTGTGGTGGCCTATTTCTCAGATGGCTTGGCTGCAAGGCTTCTCACTAGGAAATCCCCGTTCTATGACATGCTCATGGAGGAACCCACAAGTGAAGAAGAGTTTCTAGCATTCACAGATCTCTACAGAGTCTCACCCTACTTCCAATTTGCCCATTTCACGGCCAACCAAGCCATTCTAGAAGCCTTTGAGAAGGAGGAAGACAGAAACAACAGGGCTTTGCATGTCATAGACTTTGATGTCTCCTATGGCTTCCAATGGCCTTCTCTTATCCAATCTCTCTCTGAAAAGGCCACTAGTGGGAATCGCATTTCACTCAGAGTCACTGGATTCGGGAAGAATTTAAAGGAGCTTCAAGAAACTGAGGCTAGATTGGTTAGCTTCTCAAAGGGTTTTGGCAATCTTGTGTTTGAATTCCAAGGGCTTCTAAGAGGGTCAAGAGTGATCAATTTAAGGAAGAAAAAAAATGAAACTGTGGCTGTGAATTTAGTTTCTTATTTGAACACTTTGAGTAGTTTCATGAGGGTTTCTGACACATTGGGATTTGTTCATTCTCTTAACCCTTCTATTGTGGTTTTAGTGGAGCAAGAAGGAAGCAGAAGTCCCAGAACCTTCTTGTCAAGATTCACAGACTCTTTACACTATTTTGCAGCCATGTTTGATTCTCTAGACGATTGCCTTCCATTGGAGAGCACTGAGAGGTTGAGGATAGAGAAGAAGCTTCTGGGGAAAGAGATCAAGAGCATGCTCAACTATGACATGGACGGTGGAGAGTGTCCCAAGTATGAGAGGATGGAGACATGGAAGGCAAGAATGGAGAGTCATGGATTTGCTGGGACAAAAATAAGCTCGAAGTCTATAATCCAAGCAAAATTGCTCTTGAAGATGAGAACCCATTATTGCCCACTCCAGTTTGAAGCAGAAGGAGGTGGGGGTTTCAGGGTTTCTGAGAGAGATGAAGGAAGGGCCATCTCTTTAGGATGGCAGAATAGGTTTCTGCTAACCGTCTCAGCATGGCAGCCAGTGTGA 1425 0.4365 MEDPEEEELLNLSLSVSSGRERKKKGKTITRNHHHHHDPNYSMSPMDYSYHDQEGYEGKIFRLLQMRDQMLRQEHNRRKGVMVESDGGNNGLPLIHLLLTTATSIDENNLGSSLDALTELYQTVSLTGDSVQRVVAYFSDGLAARLLTRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEKEEDRNNRALHVIDFDVSYGFQWPSLIQSLSEKATSGNRISLRVTGFGKNLKELQETEARLVSFSKGFGNLVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNTLSSFMRVSDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPLESTERLRIEKKLLGKEIKSMLNYDMDGGECPKYERMETWKARMESHGFAGTKISSKSIIQAKLLLKMRTHYCPLQFEAEGGGGFRVSERDEGRAISLGWQNRFLLTVSAWQPV 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0932 474 MobiDBLite consensus disorder prediction 1 45 - -
Glsi12g0932 474 ProSiteProfiles GRAS family profile. 85 472 IPR005202 -
Glsi12g0932 474 Pfam GRAS domain family 94 472 IPR005202 -
Glsi12g0932 474 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 76 467 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0932 Glsi-ChrGlsi12 27046173 27047597 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0932 101 473 GRAS Transcription Factor Family AT3G54220 35.659 4.29e-56 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi12g0932 GRAS 8.4e-90 CL0063