Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0925 ATGATCATAGCCAAGTACCCTTCAATTAAGGGCATTAATTTTGATTTGCCCCATGTTGTTCAAGATGCCCCACCCTATCCAGAAGGAATCAAACATGTTGGAGGAGACATGTTCAAAAGTGTCCCAGAAGGTGATGCCATTATGATCAAGGGCACAACTCATAACTGGTCAGATGAAAAATGCATAAAGCTTTTCAGCAATTGCCATGAGGCCTTGAAGAAAGGAGGGAAGGTTATAGTAATAGACTTGATAATGCCAGAAGAGCCAGAGTTAAGCAGTGCTGCTAAAAGTGTTTCCATTTTTGACAATGTTATGTTCTTCCAAGGAGGTGGAATGGAAAGAACTGAGAAGCAGTTTGAGGCATTATGCAAAAAATCTGGGTTTTCTGGTTTTCGAGTTGCTTGTCGTGCTTTATCCATCTTAGGAGTCATGGAAATTTACAAATAA 447 0.4004 MIIAKYPSIKGINFDLPHVVQDAPPYPEGIKHVGGDMFKSVPEGDAIMIKGTTHNWSDEKCIKLFSNCHEALKKGGKVIVIDLIMPEEPELSSAAKSVSIFDNVMFFQGGGMERTEKQFEALCKKSGFSGFRVACRALSILGVMEIYK 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0925 148 PANTHER O-METHYLTRANSFERASE 2 128 IPR016461 GO:0008168
Glsi12g0925 148 Pfam O-methyltransferase domain 2 129 IPR001077 GO:0008171
Glsi12g0925 148 Gene3D Vaccinia Virus protein VP39 1 137 IPR029063 -
Glsi12g0925 148 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 148 IPR016461 GO:0008168
Glsi12g0925 148 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 139 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0925 Glsi-ChrGlsi12 26965411 26966489 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0925 1 148 Monolignol Biosynthesis Gene Families AT5G54160 54.362 1.36e-52 168