Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0920 ATGCATGAAGTAGCGTGGTTGAACAACCTTAAAACAGAGCCTCCAATCAAACATAAATTCCATAGGTCTATGGCTGATCTCTCTGCTTTACACATGCTCAACATTCTTCAAACATGCAAAGGCTTTGAGGGAATACCAACACTTTTTGATGTGGGAGGCCGTATAGGGCAGTCCCTTAAAATGATCATATCCAAGTACGCTTCAATTAAGGGCATTAATTTTGATTTACCTCGTGTTGTTCAAGATGTCCCACCCTATCCAGGAATCAAACATGTTGGAGGAGACATGTTCAAAAGTTTCCCAGAAGGTGATGCCATTATGATCAAGGGCACAACTCATAACTGGTCAGATAAAAAATGCATAAAGCTTTTAAGCAATTGCCATGAGGCCTTGAAGAAAGAAGGGAAGGTTATAGTAATAGACTCGATAATGCCAGAAGAGCCAGAGTTAAGTAGTGCTGCTAAATGTGTTTCCATTTTTGACAATGTTATGTTCTCCCAAGGACGTGGAATGGAAAGAACTGAGAAACAGTTTGAGGCATTATGCCAAAATCCTGGGTTTTCTCGTTTTCGAATTGCTTGTCTTGCTTTATCCATCGATCTTAGGAGTCATGGAGGTTTACAAATAAATTAG 633 0.3981 MHEVAWLNNLKTEPPIKHKFHRSMADLSALHMLNILQTCKGFEGIPTLFDVGGRIGQSLKMIISKYASIKGINFDLPRVVQDVPPYPGIKHVGGDMFKSFPEGDAIMIKGTTHNWSDKKCIKLLSNCHEALKKEGKVIVIDSIMPEEPELSSAAKCVSIFDNVMFSQGRGMERTEKQFEALCQNPGFSRFRIACLALSIDLRSHGGLQIN 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0920 210 Gene3D Vaccinia Virus protein VP39 17 195 IPR029063 -
Glsi12g0920 210 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 210 IPR016461 GO:0008168
Glsi12g0920 210 Pfam O-methyltransferase domain 9 188 IPR001077 GO:0008171
Glsi12g0920 210 PANTHER O-METHYLTRANSFERASE 6 187 IPR016461 GO:0008168
Glsi12g0920 210 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 6 195 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0920 Glsi-ChrGlsi12 26904480 26906099 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0920 12 201 Monolignol Biosynthesis Gene Families AT5G54160 49.738 5.74e-64 200