Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0914 ATGGCTGATCTATCTGCTTTACTCATGCTCAACATTCTTCAAACATGCAAAGGCTTCGAGGGAATACCAACACTTGTTGATGTGGGAGGCGGTATAGGGCAGTCCCTCAAAATGATCATATCCAAGTACGCTTCAATTAAGGGCATTGATTTTGATTTACCTCGTGTTGTTCAATATGCCCCACCCTATCCAGGAATCAAACATGTTGGAGGAGACATGTTCAAAAGTTTCCCAGAAGGTGATGCCATTATGATCAAGGGCACAAATCATAACTGGTCAGATAAAAAATGCATAAAGCTTTTAAGCAATTGCCATGAGGCCTTGAAGAAAGAAGGGAAGGTTATAGTAATAGCCTTGATAATGCCAGAAGAGCCAGAGTTAAGCAGTGCTGCTAAATGTGTTTCCATTTTTGACAATGTTATGTTCTCCCAAGGACGTGGAATGGAAAGAACTGAGAAACAGTTTGAGGCATTATGCCAAAAATCTGGGTTTTCTCATTTTCGAATTGCTTGTTGTGCTTTATCCATCTTAGGAGTCATGGAGGTTTACAAATAA 555 0.4018 MADLSALLMLNILQTCKGFEGIPTLVDVGGGIGQSLKMIISKYASIKGIDFDLPRVVQYAPPYPGIKHVGGDMFKSFPEGDAIMIKGTNHNWSDKKCIKLLSNCHEALKKEGKVIVIALIMPEEPELSSAAKCVSIFDNVMFSQGRGMERTEKQFEALCQKSGFSHFRIACCALSILGVMEVYK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0914 184 ProSitePatterns Orn/DAP/Arg decarboxylases family 2 signature 2. 18 33 IPR022657 -
Glsi12g0914 184 Gene3D Vaccinia Virus protein VP39 5 173 IPR029063 -
Glsi12g0914 184 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 182 IPR029063 -
Glsi12g0914 184 CDD AdoMet_MTases 24 121 - -
Glsi12g0914 184 Pfam O-methyltransferase domain 1 165 IPR001077 GO:0008171
Glsi12g0914 184 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 184 IPR016461 GO:0008168
Glsi12g0914 184 PANTHER O-METHYLTRANSFERASE 1 167 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0914 Glsi-ChrGlsi12 26836641 26838690 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0914 1 176 Monolignol Biosynthesis Gene Families AT5G54160 52.542 1.98e-62 195