Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0903 ATGGAGGAGATGGAATCATGTGTACCACCAGGGTTTAGATTTCGTCCAACAGAGGAAGAACTTGTGGGATATTACCTCAAGAGGAAGATAAACTCCCTCAAAATCAACCTTGATGTTATTGTTGAGCTCGATCTCTACAAAATGGAACCATGGGACTTACAAGATAGATGCAAGCTAGGATACAAGGAACAGAATGAGTGGTACTTTTTCAGTCACAAAGACAAGAAGTATCCTACGGGAACACGAACAAATAGAGCAACAGCTGCAGGGTTCTGGAAAGCAACAGGGAGGGACAAGGCAGTGATGTCTAAGAACAGAATGATAGGAATGAGGAAGACCCTAGTATTCTACAAAGGACGTGCCCCAAATGGCTGCAAAACTGACTGGATCATGCATGAATATCGCCTCCAAACTTCAGACCATGCCCCTCCTCAGGAAGAAGGATGGGTAGTGTGCAGAGCATTCAGAAAGCCAAGCCCTAGTCATCATCAGAGGCAATTAGGGTTTGAAGCACAGTACTGCTATTTTAGAGAGCAAATTAGCCATGCAAGGCCTCTATCATCATTTGCAGATGATCATCATCTTCTTCTTCATCATCCTGGTGAAGCTACAAGTTTTAGTGATCAACCCTTTCAGCAGCAGTTTATGTGCAACCACACTGAACTTATTGAACTCCCACAACCAGATGATCACAGCCCCAGTACCGCTTGTGCCCAAAACAATAATATTGGCTTATCATCAAATGAAGAATATTACAGTGAAGAAAGAAGCAATGAATGGCAAAGCTTGGACAGTTTGTTTGCTTCAAACCTGACAGATACTGTTAATTTCTTTGGACATTCGAACTTGCCCATGATACCATATAGCCATGAATTAGTACAACCACCTCAAATTCAAGCTAGCCATATCCTAGGATACTTTCCTGATTCATAA 933 0.4234 MEEMESCVPPGFRFRPTEEELVGYYLKRKINSLKINLDVIVELDLYKMEPWDLQDRCKLGYKEQNEWYFFSHKDKKYPTGTRTNRATAAGFWKATGRDKAVMSKNRMIGMRKTLVFYKGRAPNGCKTDWIMHEYRLQTSDHAPPQEEGWVVCRAFRKPSPSHHQRQLGFEAQYCYFREQISHARPLSSFADDHHLLLHHPGEATSFSDQPFQQQFMCNHTELIELPQPDDHSPSTACAQNNNIGLSSNEEYYSEERSNEWQSLDSLFASNLTDTVNFFGHSNLPMIPYSHELVQPPQIQASHILGYFPDS 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0903 310 ProSiteProfiles NAC domain profile. 8 157 IPR003441 GO:0003677|GO:0006355
Glsi12g0903 310 Pfam No apical meristem (NAM) protein 9 136 IPR003441 GO:0003677|GO:0006355
Glsi12g0903 310 Gene3D NAC domain 17 160 IPR036093 GO:0003677|GO:0006355
Glsi12g0903 310 FunFam NAC domain-containing protein 17 161 - -
Glsi12g0903 310 SUPERFAMILY NAC domain 6 157 IPR036093 GO:0003677|GO:0006355
Glsi12g0903 310 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0903 Glsi-ChrGlsi12 26689957 26691866 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0903 4 310 NAC Transcription Factor Family AT1G71930 53.333 3.69e-109 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi12g0903 NAM 4.6e-37 No_clan