Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0884 ATGTGTGACTCAACCCCAAAACAAATTAAACCCAGTTTTGCTTCAGTTCTAGAGATTAATATTTTCTTTTCTGTAGCTTCATTAATGGCCTCCAAATCTAGGTCAACTCTCTACTCTAGCTACACCGTCCCATCCCTCATTCTCTGCATTTTCTCTCGTGTTGTGCCTTTCCAATTAGTCCACGTTGGAAGTTTTTACATTTGTGATACCTTATCTTTACATGGTACTCTATCTGCTGCACCATGCCACTCTCACTCTCAAACCTCTTTGCATACCTTATCTTTACATGCTAATCTAGCTATGGATTTCTTGCCATATATTACTAAAATTAGTGATCATAGCAAAGAAAGCAAGAGCCGAAGAACTCCGAAGGGGCATTTTGTGGTGTACGTGGGCACCGAAATGACAAGATTTGTGGTTCCTATAAGTTACCTGAAGCACCCAAGACTCCAGCTTTTGCTAGAGAAAGCTGCTGATGAGTATGGGTTTGATAATCCTGATGGGATCGTTCTCCCTTGTGATGCTTCTACCTTCCGCACCCTCCTTTCTTCTTCGGAGTGA 561 0.4189 MCDSTPKQIKPSFASVLEINIFFSVASLMASKSRSTLYSSYTVPSLILCIFSRVVPFQLVHVGSFYICDTLSLHGTLSAAPCHSHSQTSLHTLSLHANLAMDFLPYITKISDHSKESKSRRTPKGHFVVYVGTEMTRFVVPISYLKHPRLQLLLEKAADEYGFDNPDGIVLPCDASTFRTLLSSSE 186
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0884 186 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 115 181 IPR003676 GO:0009733
Glsi12g0884 186 Pfam Auxin responsive protein 113 183 IPR003676 GO:0009733
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi12g0884 Glsi-ChrGlsi12 26541462 26542729 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0884 123 186 Calmodulin-binding Proteins AT5G20810 48.438 3.43e-17 73.9