Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0875 ATGGAATTCAAACTAAAATCCACTGCTATTCCTATCCCTATTCCCACTATGCTCTCCAATTCTTCTCCCTCTTCCTCTTCTTCTCCTCCCCCACTTTCCTCTCAATCTCCGCCGTCTCCTCCTCCTCCTCCGCCTGTGGTGGTCGTCAGCCCCTGTGCCGCCTGCAAGATCCTCCGCCGCCGCTGCGTCGAGAAGTGCGTCTTGGCCCCCTATTTCCCCCCCACTGATCCCCTCAAGTTCACCATTGCTCACAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAGTCTCAAAGGGCAGATGCCGTGAGCAGCATGGTGTACGAAGCAAATGCCAGGATCAGAGACCCAGTTTATGGTTGCGCGGGAGCCATAGACCAGCTTCAGAAGCAAGTTAGCGAGCTACAAGCTCAATTGGCTAAGGCTCAAGCCGAGCTGGTGAACATGCAGTGCCAACAAGCCAACTTGGTTGCGCTAATTTGCATGGAAATGAGCCAATCTCAGGAGCCGCAGCACATGGCGATTCAGCCTCAGCCACACGATGATATGAGCTGCTTCTTGGACGATAATGGCTTGGGGTCGGCTTGGGAGCCTCTTTGGACATGA 621 0.5395 MEFKLKSTAIPIPIPTMLSNSSPSSSSSPPPLSSQSPPSPPPPPPVVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAIDQLQKQVSELQAQLAKAQAELVNMQCQQANLVALICMEMSQSQEPQHMAIQPQPHDDMSCFLDDNGLGSAWEPLWT 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0875 206 Pfam Lateral organ boundaries (LOB) domain 51 148 IPR004883 -
Glsi12g0875 206 ProSiteProfiles LOB domain profile. 50 151 IPR004883 -
Glsi12g0875 206 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 50 177 - -
Glsi12g0875 206 MobiDBLite consensus disorder prediction 13 29 - -
Glsi12g0875 206 MobiDBLite consensus disorder prediction 1 43 - -
Glsi12g0875 206 Coils Coil 130 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0875 Glsi-ChrGlsi12 26442852 26444010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0875 47 206 AS2 family AT1G07900 70.122 5.38e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Glsi12g0875 LOB 4.1e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0875 12 26442852 26444010 Glsi12g0875 12 26442852 26444010 ECH