Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0857 ATGCCGCCTGAACCATTACCTTGGGACCGAAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCGGAATCGCTAGGGTCTGTGGCGAGATGGAGAGACTCTTCTCATCACGGGTCCCGAGAGTTCAATCGGTGGGGATCGGCCGATTTCCGCAGACTGCCAGGTCATGGTAAGCAGGGTGGTTGGCATCTTTTTTCCGAAGAATCTGGTCATGGTTATGCACTTTCTCGGTCCAGTGACAAGACTCTGGAAGATGAGAACTGTCGTCCATCTGTTTCCCGAGGGGATGGAAAATATGGTAGGAACAGTAGGGAAAATAGAGGATCTTTTAGCCAGAGAGATTGGAGAGGACATTCGTGGGAGACAACTAACGGCTCTATAAATTTGTCCAGAAGGCCACCAGGTGGGACTACCGACCAGAGGTCTGCGGATGACATGCTAGCATATCCTTCTCGTCCTCATTCTGACGTTGTAAATACTTGGGATCAGCATCAATTGAAAGACCAGCATGATAAGATGGGCAGTGTCAATGGGATGGGCACAGGGCAGAGATGTGATAGAGAACATTCTCTGGGTTCAATTGACTGGAAGCCTCTTAAATGGACCCGTTCTGGAAGCTTGTCTTCACGAGGCTCAGGTTTTAGCCATTCAAGTAGCTCGCGGAGCATTGGAGGGGCAGAATTCAATGAATCAAAGTCTGAGTTGCAACCAAAAAATGCAACTGCTGTTGAATCTCATTCAGGGGATGGTGCTGCATGCATGACATCTTCTGCACCCTCTGAAGAGACAATGTCTAGGAAGAAGCCTCGGCTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAGGAACCTGATGTAAGTGCAAGCAAGGATGGCCCTGTCTCGTCTACTGGTAATATGGAACCCTTGGAATCCTCTAATTTTCTACTAGATAAAAGCCCAAAACTTACCGGATTTTCAGATTGTGCATCTCCTGCAACTCCATCTTCTGTTGCCTGTAGTTCCTCACCAGCAGGTGTGGATGATAAATTATATGGAAAATCTGCAAATAGTGACAATGATGTCAGTAATTTGAGTGGCTCACTGGGTCCTGGGCCTCAGAATAATCTGCAAACGATCTCTTTTAATTTAGAGAAGTTGGATATGGACTCTTTAACTAATTTGGGTTCTTCACTTAGTGAGTTGCTACAATCTGATGATCTGAGTACTGAGGATCCTGGTACAGCAAGATCTGCTGCAATGAATAGGCTGCTGATATGGAAAGCTGATCTCTCAAAGGTATTGGAGGTTACTGAAGCTGAAATTGATTCACTAGAAAATGAACTGAAGTCCCTGAAATCTGAATCTGGAAACAGCTGCTCGTGTCCTGCAGCATCGGGCTCCTTGCAGGTGGAGAACAAAACAAAATCTTGTGAAGAACATTTTGGAGGCTCTGACAAGGTCTCTCGACCAGAACCATTGCAAATTTTTTCTTCTGTTGATCCTGATGTGGAGAAGATGCCCCCTTCAACTAACTTGCATGGTGTTCATGAAGTTTGCATGGAAGGAGATATTGATAGTCCTGGAACAGCAACCTCTAAATTTGTGGAGTCTCGACCCCTGATTAAAGCAGTTTCTTCATGTGATATAGGGAGACATGATAATTGCTCTGGAGACTTGGATGCTATTCAAACTGCAAGCAAGAAATGCTTAGTGCCCTGTTCTACTAGTGAGCAAGCTAACGGATCTGCTTATGATGGTGGTGGTACATCTATGAAAGTAAAAGATGGCATGGGTACTATACCTGGTGCAAGTGTTTGGTTTAACTCTGATGATATATTGTATAATGCAATTATTTCTTCCAATAAAGAATATGCTACCAAAGTGAGTGAAGTATTCGCTAATTTATTGCCAAAGGATTGTTGTAAGATTGGTAATATAGGAGCTATTAGTGACTTATTCTCTCCAAATGGTGCATTCATTAAAGAAAAATTTGCAGAGAGAAAGAGGTTTGCACGATTTAAGGAGCGAGTTATAACCCTTAAGTTTAGAGCATTGCATCACCAGTGGAAAGAAGATATGCATTTACAGTCTCTAAAGAAATGCCGCCTGAAATCTCAGAAGAAACTTGAAGTAGGCTTGCGGACTACTAATAGTGGTCATCAAAAGAATCGATCCTCCATTCGTCCTCGTTCTCCGTACCCTGGAAATCATCCAAGTTTAGTTCCAACAGATGAGGTAATTAATTTTACAAGAAAACTGCTTTCAGACCCCCAAGTTAAAGTTCACAGGAGCACCTTGAAGATGCCAGCCCTAATTTTGGATGAGAGGGAGAAGATGATATCGAGGTTTGTATCTACTAATGGGTTGGTTGAAGATCCGTTGGCGTATGAGAAAGAAAGGGCTGGAATCAACCCTTGGACATTAGAGGAGAAGAATATTTTTATGGAGAAATTTGCTGCCTTTGGAAAAGATTTCCAGAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCTGACTGTGTTGAATTCTATTACAAAAACCATAAATCTGATGGTTTTGAGAAAGTTAAGAAGGATACTAGTAAGCTAGGGAAGTCGTTTTTGACCAACACTGACTTGTTGACATCAGGAAAGAAATGGAATCGTGAAATAAATGCTGCTTCACTTGAGATCTTGAGTGCAGCTTCAGAGATGGCGGGCCGTGCAGATGGCATTAATGGTAATAACAAAATGCATTCAGGAAGTTTACTTTTAAGTGGTTATGGTAATATAAAAAGATCAAAGGGTGAGGCTAACTTCTTAGAGAGATCAAGCTGTTTTGACATTCTTGGGGATGAAAGAGAGACGGTTGCAGCTGATGTATTGGCTGGTATATGTGGTTCTCTTTCATCTGAGGCTATGAGCTCCTGTATAACAAGTTCTATTGATCCTGTAGAGAATAACAAGGACAGGAAATATCTGAAAGTGAAGCCTGTTAGCAAGCAATTGTTGACGCCTGATGTTACTCAGGATGTTGATGATGAGACTTGTTCAGATGAGAGCTGTGAAGACATGGATCCTACTGATTGGACTGATGAGGAGAAGTCAGCCTTTCTTAAGGCTGTATCATCTTTTGGTAAGGATTTTGCGAAGATATCACGATGTGTGGGTTCAAGGTCGCAAGATCAGTGCAAAGTCTTTTTCAGCAAGGCTAGGAAATGCCTTGGATTGGATGTCATGCGCCCCAAATTGGCAACTGTAGGATCACTAGTAAATGATGATGCAAATGGTGGTGGGAGTGACACAGATGATGCATGTGTTGTGGAGACAGGTTTGGCGATTGGGACAGAAGTAGATTGTCAAGATGCTGAAGATGTGAATATTATGGTTTCTGATGCTTGTGAAATGAAAGGTAAGTCTAAATTGGGCTCAGATGGTGATGTCTTGCGCAGTTCTGACGAGTGTGATTCAGGCAGTGGCCAGACAGCTATAAATATGTCATCTAGCATAGAAGTGGACAAAAATGAAGCAAATAGATTGGGTGGTGCAATTACAGAGTCTGTGGCTGCTGCGGGACTAATTGAACCATCTCAATGTAATTCTGTTGTTGAGGTTAAACTGGTTTCTGAGGTTTCTTCTGGAGGTCTTGGAAATGAGTTGGAGGGGCCGAAACTGTCACTACTTCAATGTCTTGAAGATAGAGATAATAAGCATGAAGCCGTTGCAAATGGTGTAGTTGAACAAAAAAGCTCAGTACAGCATTCAACTACAATGGCAAATGCGTTGCTCTCGTCTGTGGGCAATTCTTGTACAGGGTTAAGTCTTGAAGGTGAATATAAGCCCCAAGTGACTCTTGGAGAGCCTTCTATATCAGCTTTGCCATTGGAGAATTCTCAGACAACTGCAAGTTCACCGTTGCAAAATACTATTTCTGTTCAATGTGGGAAAACAGCTAGTCAAGATCATCTGCCTTCTAAGTGTGATTTTCAGGGAAGCAGGGATATGCACTGTCATAATTCCAGAAGCAATGATGATCAACAGATTCATATTCCTAGGCAATTATTGAACTGTGTCGAGGCTAGCATCCTCCACGGTTACCCTTTGTCTGTTAAAAATGAAGTGAATGGTGATATGAGTTGCAGCAGTTCAACAACTGAGTTGCCTCTTCTATCCCAAAAGATTGAACAAGCCAGTGATCATTACAAAACAAAGTTACGGCGGTCATCAGATTCAGAAATAACTTCCAGAAACGGTGATGTGAAATTGTTTGGGAAGATATTAACGACTCCTTCATCCACCCAGAAAACTAATTTGAGTACCAAGGGAAGTGAAGAAAATGGCACCTGTCATCTCAAGTTAAACAGCAAGTCTTCCAGTCTGAAATTTAATGGCCATCAACATGCTGATGGAAATTCAACAATTTTGAAGTTTGATGGTAATGATTATAATATAGCCCTTGAAAATGTTCCCGTGAGGAGTTATGGTTATTGGGACGGGAATAAAATACAGACTGGTTTTTCATCATTACCTGAGTCTGCCATAATGCTTGCAAATTATCCTGCTGCCTTTGGTAATTATCCTTCATCCTCAGCTAAATTGGAGCAACAGTCATCGCAAATGATTACGAAGAGTAGTGAACAGCACTTGAATGGTGTATCTGGTTTTGCAACTAGTGAAATCAATAGCAGCAACGGCATCATTGATTACCAGATGTTTAGAGGGAGGGATGGCTCGAAAGTGCAGCCATTTATGGTAGACATGAAACACAGACATGATGTATTATCTGAGGTGCAGAGAAGAAATGGTTTTGAAGCAATGTCAAATTTACAGCAGCAGGGAAGGGGTATGGTTGGATTGAATGGTGTTGGGAGACCTGGGATTCTTATGGGAGGATCACAGAGTGGTGTTTCAGATTTTGTGGCAGCTTTCAAAATGCATTATTCCAATTCTGACCAGTATGGTGATCAGAATGGGAGTATCATGAGAGAGGATGAATCTTGGGGAGGGAAAGGGAACTTAAACAGGTAG 5001 0.4229 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFNRWGSADFRRLPGHGKQGGWHLFSEESGHGYALSRSSDKTLEDENCRPSVSRGDGKYGRNSRENRGSFSQRDWRGHSWETTNGSINLSRRPPGGTTDQRSADDMLAYPSRPHSDVVNTWDQHQLKDQHDKMGSVNGMGTGQRCDREHSLGSIDWKPLKWTRSGSLSSRGSGFSHSSSSRSIGGAEFNESKSELQPKNATAVESHSGDGAACMTSSAPSEETMSRKKPRLNWGEGLAKYEKKKIEEPDVSASKDGPVSSTGNMEPLESSNFLLDKSPKLTGFSDCASPATPSSVACSSSPAGVDDKLYGKSANSDNDVSNLSGSLGPGPQNNLQTISFNLEKLDMDSLTNLGSSLSELLQSDDLSTEDPGTARSAAMNRLLIWKADLSKVLEVTEAEIDSLENELKSLKSESGNSCSCPAASGSLQVENKTKSCEEHFGGSDKVSRPEPLQIFSSVDPDVEKMPPSTNLHGVHEVCMEGDIDSPGTATSKFVESRPLIKAVSSCDIGRHDNCSGDLDAIQTASKKCLVPCSTSEQANGSAYDGGGTSMKVKDGMGTIPGASVWFNSDDILYNAIISSNKEYATKVSEVFANLLPKDCCKIGNIGAISDLFSPNGAFIKEKFAERKRFARFKERVITLKFRALHHQWKEDMHLQSLKKCRLKSQKKLEVGLRTTNSGHQKNRSSIRPRSPYPGNHPSLVPTDEVINFTRKLLSDPQVKVHRSTLKMPALILDEREKMISRFVSTNGLVEDPLAYEKERAGINPWTLEEKNIFMEKFAAFGKDFQKIASFLDHKTTADCVEFYYKNHKSDGFEKVKKDTSKLGKSFLTNTDLLTSGKKWNREINAASLEILSAASEMAGRADGINGNNKMHSGSLLLSGYGNIKRSKGEANFLERSSCFDILGDERETVAADVLAGICGSLSSEAMSSCITSSIDPVENNKDRKYLKVKPVSKQLLTPDVTQDVDDETCSDESCEDMDPTDWTDEEKSAFLKAVSSFGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDVMRPKLATVGSLVNDDANGGGSDTDDACVVETGLAIGTEVDCQDAEDVNIMVSDACEMKGKSKLGSDGDVLRSSDECDSGSGQTAINMSSSIEVDKNEANRLGGAITESVAAAGLIEPSQCNSVVEVKLVSEVSSGGLGNELEGPKLSLLQCLEDRDNKHEAVANGVVEQKSSVQHSTTMANALLSSVGNSCTGLSLEGEYKPQVTLGEPSISALPLENSQTTASSPLQNTISVQCGKTASQDHLPSKCDFQGSRDMHCHNSRSNDDQQIHIPRQLLNCVEASILHGYPLSVKNEVNGDMSCSSSTTELPLLSQKIEQASDHYKTKLRRSSDSEITSRNGDVKLFGKILTTPSSTQKTNLSTKGSEENGTCHLKLNSKSSSLKFNGHQHADGNSTILKFDGNDYNIALENVPVRSYGYWDGNKIQTGFSSLPESAIMLANYPAAFGNYPSSSAKLEQQSSQMITKSSEQHLNGVSGFATSEINSSNGIIDYQMFRGRDGSKVQPFMVDMKHRHDVLSEVQRRNGFEAMSNLQQQGRGMVGLNGVGRPGILMGGSQSGVSDFVAAFKMHYSNSDQYGDQNGSIMREDESWGGKGNLNR 1666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 711 736 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 115 137 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 204 305 - -
Glsi12g0857 1666 ProSiteProfiles SANT domain profile. 1019 1067 IPR017884 -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 17 43 - -
Glsi12g0857 1666 Coils Coil 425 452 - -
Glsi12g0857 1666 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1107 1661 - -
Glsi12g0857 1666 Gene3D - 959 1075 - -
Glsi12g0857 1666 Gene3D - 780 852 - -
Glsi12g0857 1666 SUPERFAMILY Homeodomain-like 787 849 IPR009057 -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 78 114 - -
Glsi12g0857 1666 ProSiteProfiles SANT domain profile. 799 850 IPR017884 -
Glsi12g0857 1666 SUPERFAMILY Homeodomain-like 1018 1067 IPR009057 -
Glsi12g0857 1666 SMART sant 800 848 IPR001005 -
Glsi12g0857 1666 SMART sant 1017 1065 IPR001005 -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 711 730 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 73 189 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 263 291 - -
Glsi12g0857 1666 Pfam Myb-like DNA-binding domain 1020 1060 IPR001005 -
Glsi12g0857 1666 CDD SANT 1021 1059 IPR001005 -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 348 371 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 1644 1666 - -
Glsi12g0857 1666 ProSiteProfiles Myb-like domain profile. 1013 1063 IPR001005 -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 353 371 - -
Glsi12g0857 1666 MobiDBLite consensus disorder prediction 204 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0857 Glsi-ChrGlsi12 26251136 26259805 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi12g0857 Myb_DNA-binding 2.8e-08 CL0123