Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0855 ATGATATCGAGGTTTGTATCTACTAATGGGTTGGTTGAAGATCCATTGGCGTATGAGAAAGAAAGGGCTGGAATCAACCCTTGGACATCAGAGGAGAAGAATATTTTTACAGAGAAATATGCTGCCTTTGGAAAAGACTTCCGGAAAATTGCTTCTTTTCTTGACCACAAGACAACTGCAGACTGTGTTGAATTCTATTACAAAAACCATAAATCTGATTGTTTTGAGAAAGTAAAGAAGGATGTTAGCAAGCTAGGGAAGTCGTTTTTGACCAACACTGACTTGTTCACATCAGGAAAGAAATGGACTCGTGAAAAAAATGCTGCCTCACTTGAGCTATTGAGTGCAGCTTCAGAGATGGCAGGTCGTGCAGATGGCATTAATAGTAATAAAAAATTTCATTCAGGAAGTTTTCTATTAGGTGGTTGGGGTAATGTTAACAGAACAAAGGGTGAGGATAGCATCCTAGAGAGATCAAGCAGTTTTGATGTTCTGGGGGATGAAAGAGAGACAGTTGCAGCCGATGTATTGGCTGGTATATGCGGTTCTCTTTCAGCTGAGGCTATGAGCTCTTCTAATACGAGTTCTGTTACTCCTGTAGAGAATAACAAGGACAGGAAATTCCTGAAAGTGAAGCCTGTTGGCAAGCAATTGTTGATGCCTGATGTTTCTAAGAATGTTGATTATGAGACTTGTTCAGATGAGAGCTGTGAAGACATGGATCCTACTGATTGGTCTGATGAGGAGAAGTCAGCCTTTCTTAAGGCTGTATCATCTTTTGGTAAGGATTTTGCAAAGATCTCACAGTGTGTGGGTTCAAGGTCGCAAGATCAGTGCAAAGTATTTTTCAGCAAGGCTAGGAAATGCCTTGGATTGGATCTCATGCGCCCCAAATCGGTAATTGTGGGATCACCAGTGAATAATGATGCAAATGGTGGTGGGAGTGACACAGATGATGCATGTGTTTTGGAGACAGGTCTGGCGATTGGCACTGATAAGTCAGGCACTAAAACAGATGAGAATCTGCCTTTGTCTGCCATGAATGCATACACTGATGAATTGAATCCTGTTGAATTAAGGAACTGGTCAACAGACTCAAACAGATCAAAAAATATTAATGGGACAGAAGTAGCTGATCAAGATGCTGAAGATGTGAATATTATGGTTTCTAATGCTTGTGAAATGAAGGGTAAGTCTAAATTGGGCTCAGATGCTGATGTCTTCCACAGTTCTGACAGGCGTGGTTCAGTCTGTGGCCAGACAACTAAAAATATGTCAGCTAGCGTAGAAGGAGAAGACGAAGCAAATAGATTGAATGGTGCAGTTACAGAGCCAGTATCTGCTGCAGAGATAATTGAACCATGCCAATCTAATTCTGTTGTCGAGGTTAAACTGGTTTCTGAGGTTTCTTCTGGAGGTCTTGGAAACGAGTTGGAGGGGCTGAAATTGTCACTACCTCAATGTCTTGACGATAGAGATAATAAATGCGGAGCCATTGCAGATTGTGTAGTTGAATTGAAAAGTTCAGTACAAGATTCAAATACAATGGTAAATACTTTGCTCTCATCTGTTAGCAGTTCTTGTACGGGATTAATTCTTGAAGCTGAAAATCAGAACCAAGCATGTCTTGGAGAGGCTTGTATATCAGCATTGCCAGTGGAGAATTCTCAGACAACTGAGAATTCATTGTTGCAAAATACTGTTGCTGTTCAAGGTGAGAAAACAGATAGTCAAGATCATTTGCTTTCTACGTGTGATTTTCAGGGAAGCAGAGATGTATGCTGTCATAATTCCAGAAGCAGTGATGACCAGCAAATTCATATTCCTAGGCATTTATTGGACCGTGTCGAGGCTGCTAGCATCCTCCAGGGCTATCCCTTGCCCATTAAAAAAGAAGTGAATGATGATATGAGTTGCAGCAGTTCAGCAACTGAGTTGCCTCTTCTGGCCCAAAAGATTGAACAAGCCAGTGATCATTACAAAACACAGTTACGGCATTTTTCAGATTCAGAAATAACATCCAGAAATGGTGATGTGAAATTGTTTGGGAAGATATTAACCAATCCTTCATCCAACCAGAAAACTAATTTGAGTACCAAGGGAAGTGAAGAAAATTGTACCCCTAATCCCAATTTAAGCAGCAAGTCTTCCAGTCTGAAATTTAATGGCCATCAACGTGCTGATGGAAATTCAACAATTTTGAAGTTTGATCGTAATGATTATAGTGTAGGCCTTGAAAATGTTCCCATGAGGAGTTATGGTTATTGGGACGGGAATAAAATACAGACTGGTTTTTCATCATTACCTGATTCTGCCATCTTGCTTGCAAAATATCCTGCTGCCTTTAGTAATTATCCTACATCCTCAGCTAAATTGGAGAACCAGTCATTGCAGGCGTTTACCAAAAGCAATGAACAGCACTTGAATGGTGTATCTGGTTTTGCAACTAGAGAAATCAATAGCAGCAATGGCTTCATTGATTATCAGATGTTTAGGGGTAGGGATGGTCCGAAAGTGCAGCCATTTATGGTAGACATGAAACACCGACATGATGTATTATCGGAGGTGCAGAGAAGAAATGGTTTTGAAGCAATCTCAAATTTACAACAGCAGGGTAGGGGTATGGTTGGATTGAATGGTGTTGGGAGACCCGGGATTCTTATGGGAGGAGCACACAGTGGTGTCTCAGATTTTGTGGCAGCTATCAAAATGCATTATTCCAATTCTGACCAGTATGCTGGTCAGACTGGGAGTATCATGAGAGAGGATGAATCTTGGGGAGGGAAAGGTGACTTAAGCAGGTAG 2805 0.4107 MISRFVSTNGLVEDPLAYEKERAGINPWTSEEKNIFTEKYAAFGKDFRKIASFLDHKTTADCVEFYYKNHKSDCFEKVKKDVSKLGKSFLTNTDLFTSGKKWTREKNAASLELLSAASEMAGRADGINSNKKFHSGSFLLGGWGNVNRTKGEDSILERSSSFDVLGDERETVAADVLAGICGSLSAEAMSSSNTSSVTPVENNKDRKFLKVKPVGKQLLMPDVSKNVDYETCSDESCEDMDPTDWSDEEKSAFLKAVSSFGKDFAKISQCVGSRSQDQCKVFFSKARKCLGLDLMRPKSVIVGSPVNNDANGGGSDTDDACVLETGLAIGTDKSGTKTDENLPLSAMNAYTDELNPVELRNWSTDSNRSKNINGTEVADQDAEDVNIMVSNACEMKGKSKLGSDADVFHSSDRRGSVCGQTTKNMSASVEGEDEANRLNGAVTEPVSAAEIIEPCQSNSVVEVKLVSEVSSGGLGNELEGLKLSLPQCLDDRDNKCGAIADCVVELKSSVQDSNTMVNTLLSSVSSSCTGLILEAENQNQACLGEACISALPVENSQTTENSLLQNTVAVQGEKTDSQDHLLSTCDFQGSRDVCCHNSRSSDDQQIHIPRHLLDRVEAASILQGYPLPIKKEVNDDMSCSSSATELPLLAQKIEQASDHYKTQLRHFSDSEITSRNGDVKLFGKILTNPSSNQKTNLSTKGSEENCTPNPNLSSKSSSLKFNGHQRADGNSTILKFDRNDYSVGLENVPMRSYGYWDGNKIQTGFSSLPDSAILLAKYPAAFSNYPTSSAKLENQSLQAFTKSNEQHLNGVSGFATREINSSNGFIDYQMFRGRDGPKVQPFMVDMKHRHDVLSEVQRRNGFEAISNLQQQGRGMVGLNGVGRPGILMGGAHSGVSDFVAAIKMHYSNSDQYAGQTGSIMREDESWGGKGDLSR 934
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0855 934 SUPERFAMILY Homeodomain-like 11 71 IPR009057 -
Glsi12g0855 934 Gene3D - 185 297 - -
Glsi12g0855 934 ProSiteProfiles SANT domain profile. 243 291 IPR017884 -
Glsi12g0855 934 Gene3D - 4 76 - -
Glsi12g0855 934 MobiDBLite consensus disorder prediction 414 429 - -
Glsi12g0855 934 SMART sant 241 289 IPR001005 -
Glsi12g0855 934 SMART sant 24 72 IPR001005 -
Glsi12g0855 934 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 930 - -
Glsi12g0855 934 MobiDBLite consensus disorder prediction 690 718 - -
Glsi12g0855 934 Pfam Myb-like DNA-binding domain 244 284 IPR001005 -
Glsi12g0855 934 ProSiteProfiles SANT domain profile. 23 74 IPR017884 -
Glsi12g0855 934 CDD SANT 245 283 IPR001005 -
Glsi12g0855 934 SUPERFAMILY Homeodomain-like 241 291 IPR009057 -
Glsi12g0855 934 MobiDBLite consensus disorder prediction 412 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0855 Glsi-ChrGlsi12 26244714 26247518 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Glsi12g0855 Myb_DNA-binding 1.9e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0855 12 26244714 26247518 Glsi12g0855 12 26244714 26247518 ECH