LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi12g0853	ATGGGTTATTCTAAATTTTATGTTCTATTGCTTTTATCAATTTATGTTGAAATTTATTTGGCCTCGCCTATCGAAGATCAAAAGAGAGATAAGATAACGCAGTTGCCAGGACAGCCAATAAATGTAGGATTTGCTCAGTACTCGGGTTATGTGACAGTGAATGAGCAAGCTGGGAGGGCACTATTCTACTGGTTGATTGAGTCACCCGCGAATCGTGAACCCCAGTCCAGGCCACTTGTGTTGTGGCTTAATGGTGGTCCTGGATGCTCCTCTATTGCTTATGGTGCGGCGGAAGAGATAGGTCCTTTTCGCATTAGGCCTGATGGGATGTCACTTTACCTGAATCCATATGCTTGGAATAATTTAGCCAATATACTTTTCCTTGAGTCTCCTGCCGGTGTTGGTTTTTCTTATTCGAATGAAACATCGGATCTGTACACAGTGGGTGACCAGAGAACAGCTGAAGATGCATATAAATTTCTAGTTAAGTGGTTTGAAAGATTTCCTCGGTATAAGCACAGAGATTTCTATATTGCCGGAGAAAGTTATGCAGGTCACTATGTTCCTCAGTTGGCACAAATGGTTTACCAGAAAAACAAGGAAGTCCAGAATCCGGTTATAAATTTTAAGGGATTTATGGTTGGAAATGCTGTCACTGATGATTACCATGATTATGTTGGCACATTCGAGTACTGGTGGACCCATGGTTTGATTTCAGATTCCACATTTAGGATGCTACAAACTGCCTGTGACTTTGGATCCTCCCAGCATCCATCAGGACAATGCACAGAGGCTCTAAAAGCTGCAGTTCTGGAGCAGGGAAACATTGACCCATATAGCATTTATACACGGCCGTGCAATGATGCTGTATCACTCAAGCGCAGCTTGAGGGGCCGCTATCCATGGATGTCCAGAGCTTATGATCCTTGTACGGAGAGGTATTCTGACTTATATTTCAATCATCCTGAAGTTCAGAAGGCACTCCATGCCAATGTAACAGATATTTCTTATTCATGGAAGACGTGCAGCAATATTGTTGGGAACTACTGGGCGGATTCTCCACTATCTATGCTTCCTATATATCGAGAACTCATTAATGCTGGTCTCAAGATATGGGTATACAGTGGAGACACAGATTCCGTGGTTCCAGTAACTGCAACTCGATATTCTATCGATGCCTTAAAGCTACCAACCATCATCAACTGGTACCCTTGGTATGATAATGGCAAGGTTGGTGGCTGGAGCCAAGTTTATAAGGGGCTGACATTGGTTACAGTAACAGGAGCCGGGCATGAGGTTCCGCTTCATCGGCCTCGCCAAGCATTGATTCTTTTCAGGTCATTCTTGGAGAACAAGCCCATGCCAAGTTAG	1371	0.4369	MGYSKFYVLLLLSIYVEIYLASPIEDQKRDKITQLPGQPINVGFAQYSGYVTVNEQAGRALFYWLIESPANREPQSRPLVLWLNGGPGCSSIAYGAAEEIGPFRIRPDGMSLYLNPYAWNNLANILFLESPAGVGFSYSNETSDLYTVGDQRTAEDAYKFLVKWFERFPRYKHRDFYIAGESYAGHYVPQLAQMVYQKNKEVQNPVINFKGFMVGNAVTDDYHDYVGTFEYWWTHGLISDSTFRMLQTACDFGSSQHPSGQCTEALKAAVLEQGNIDPYSIYTRPCNDAVSLKRSLRGRYPWMSRAYDPCTERYSDLYFNHPEVQKALHANVTDISYSWKTCSNIVGNYWADSPLSMLPIYRELINAGLKIWVYSGDTDSVVPVTATRYSIDALKLPTIINWYPWYDNGKVGGWSQVYKGLTLVTVTGAGHEVPLHRPRQALILFRSFLENKPMPS	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi12g0853	456	ProSitePatterns	Serine carboxypeptidases, histidine active site.	421	438	IPR033124	GO:0004185
	Glsi12g0853	456	PANTHER	SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE	31	438	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	Gene3D	alpha/beta hydrolase	26	288	IPR029058	-
	Glsi12g0853	456	ProSitePatterns	Serine carboxypeptidases, serine active site.	178	185	IPR018202	GO:0004185
	Glsi12g0853	456	Gene3D	-	357	450	-	-
	Glsi12g0853	456	SUPERFAMILY	alpha/beta-Hydrolases	27	454	IPR029058	-
	Glsi12g0853	456	FunFam	Carboxypeptidase	357	451	-	-
	Glsi12g0853	456	FunFam	Carboxypeptidase	26	288	-	-
	Glsi12g0853	456	Pfam	Serine carboxypeptidase	36	451	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	421	434	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	115	127	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	164	189	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	PRINTS	Carboxypeptidase C serine protease (S10) family signature	128	138	IPR001563	GO:0004185\|GO:0006508
	Glsi12g0853	456	Gene3D	-	310	346	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi12g0853	Glsi-ChrGlsi12	26225060	26229931	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi12g0853	320	454	Calmodulin-binding Proteins	AT2G22960	28.676	2.39e-13	66.6

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Glsi12g0853	12	26225060	26229931	Glsi12g0853	12	26225060	26229931	ECH