Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0845 ATGAAAAGTAGTGGTAGTGGGAATGGCCATGGCAGTGAAAAACCGGTGCTGTCACCTTCTTCATTCCCTCCTCTTCCCACCTCCCTCACCTGCCTCTCTCAGAATCCTTCAGAAAACCCAGTTCCAATTCTGAGAATGGCTTCCAACACCTTGATGAGCTGTGGTATTGCCACTGCCTCTGCCTTTCCTTCTGTCCTTTCTTCCTCAAAATCCAGATTCGCCACCGCTGCCCCACTCCCCTGCGGTGCAGCCACTGCCTCTTCTCGCCTCACCATGACCGCTGACTGGATGCCCGGCCAGCCCCGACCACCTTACCTCGATGGTTCAGCACCTGGTGACTTCGGGTTCGATCCTCTTCGTCTAGGGGAAGTCCCAGAGAATCTTGAGAGATACAAAGAGTCAGAACTCATTCACTGCAGATGGGCTATGCTTGCTGTTCCAGGGATTTTGGTACCAGAGGCATTGGGTTTAGGAAACTGGGTACAAGCTCAGGAATGGGCTGCAAAACCCGGGGGCCAAGCGACGTACCTCGGGAACCCAGTTCCATGGGGCACCCTCCCCACCATTTTGGTCATTGAATTTCTAGCCATTGCCTTTGTGGAGCACCAACGCAGCATGGAGAAAGACCCTGAGAAGAAGAAATACCCTGGTGGTGCTTTCGATCCTTTGGGCTACTCCAAGGACCCTGTCAAGTTCGAAGAATACAAAGTCAAAGAGATTAAAAATGGTCGTCTGGCTCTGTTGGCTTTTGTGGGGATCTGCGTTCAACAATCAGCATACCCAGGCACAGGGCCTTTGGAGAACTTGGCAACTCACTTGGCTGATCCATGGCACAACAACATTGGGGATGTCATCATCCCTAGATCGGTTTCACCCTGA 879 0.5233 MKSSGSGNGHGSEKPVLSPSSFPPLPTSLTCLSQNPSENPVPILRMASNTLMSCGIATASAFPSVLSSSKSRFATAAPLPCGAATASSRLTMTADWMPGQPRPPYLDGSAPGDFGFDPLRLGEVPENLERYKESELIHCRWAMLAVPGILVPEALGLGNWVQAQEWAAKPGGQATYLGNPVPWGTLPTILVIEFLAIAFVEHQRSMEKDPEKKKYPGGAFDPLGYSKDPVKFEEYKVKEIKNGRLALLAFVGICVQQSAYPGTGPLENLATHLADPWHNNIGDVIIPRSVSP 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0845 292 Gene3D Chlorophyll a/b binding protein domain 97 283 - -
Glsi12g0845 292 MobiDBLite consensus disorder prediction 1 15 - -
Glsi12g0845 292 MobiDBLite consensus disorder prediction 1 29 - -
Glsi12g0845 292 Pfam Chlorophyll A-B binding protein 103 257 IPR022796 -
Glsi12g0845 292 SUPERFAMILY Chlorophyll a-b binding protein 86 286 - -
Glsi12g0845 292 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 83 283 IPR001344 GO:0009765|GO:0016020
Glsi12g0845 292 FunFam Chlorophyll a-b binding protein, chloroplastic 97 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0845 Glsi-ChrGlsi12 26149207 26154560 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0845 46 244 Chloroplast and Mitochondria Gene Families AT3G54890 81.910 1.01e-109 315