Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0824 ATGGTGGAAATCAAAGTCACTTCGAGGGAAACCATCAAACCATCTTCACCAACTCCCGAAGAACACAAAATTCTCAAACTTAGTTCCTTTGATCTTCTTCATCGCAACACCTATTTTCCATTAATCTTATTTTACCCTAATCATCATCAGTACCCTTCTTCCCATGCTCAGTTGAAAAAATCACTTTCAGAGGCACTCACCATCTTCTACCCTCTAGCAGGTGCTGTATACATAGAAGCCACAGTGAACATAACCATGGCCGAGTTCCTGAACCCACCCAAACTGGAATTTCTCAATAAATTGCTTCCATGTGAGCCTTACAAGCTTCTGCAACCAAACCCAGAAGAAGCAGCAGCAGCAGAAGCATTGCCCCATTTGCTTGTTCAAGTGAACACTTTCGGGTGTGGTGGTATAGCCATTGGTTTGTGCAATCTCCACACGATCACAGATGCATGCTCTTGCTGTGTCTTCTTGAAGACATGGGCTGCGATTTGCCGTGGTGATTCGGACGATGAGATTTCATGGCCTGATTTCTCTTCTGCGTTTTCTTTGTTCCCTCCCAGAGACACTTCTGGTATGCGAGCTGGTGTGCTTTTAGGGTCCAAGACGGCGAAGTGCAGCGTAAGAAGATTCTTGTTCAATGAAAAAGCCATTAACAACCTAAGGACCGAATCAAAAGATGATCCTACGCCTACGCGTTATCAAGTTCTGTCATCTTTCATCTGCAAACACATGGTTCTAGCAAGCAGACAGAAAACCATGGCAGTAGCTCTACACATCGTGGACATAAGAAGAAGAATGGGCGACCCATTCTCCAAGAACTCCATGGGAAACCTCTTGTGGCCAGCAATGGTGGTTTATGACAGAATCAATTCAAACACTCAGATCAAAGATTTGGTCAGAACCATGAGAGAAAAGATGGGTAAGATCAACAGGGAGTTGTTTCTGAGAATGCAGGGAGATCCCAATTTTCTGAAGAGCGATGAGTGTGCAGAGTTGCTTCTTGAAGGGATAGAGAAGAAGAAGCCAAGTTGTTTTGTGTTTGCGAGTTGGGGGAATTTGGGGTTTGATAAGGTGGATTTTGGCTGGGGGAAGCCTTTGTGGGTGGGTGTGAGAGGGGGTAATCAAGAAAGTGTTCCAAATACAGTTGTGATAACTGAGACGAAGGGAGGAATAGAGGCATGGGTGACTATGGAAGAAGAAGATATAGCTGCTTTGGAGGAAGATAAGGGCTTTCTCAGATTTGCGTTGCTTAATCCTTCAGTTTCAAACATCTAG 1278 0.4452 MVEIKVTSRETIKPSSPTPEEHKILKLSSFDLLHRNTYFPLILFYPNHHQYPSSHAQLKKSLSEALTIFYPLAGAVYIEATVNITMAEFLNPPKLEFLNKLLPCEPYKLLQPNPEEAAAAEALPHLLVQVNTFGCGGIAIGLCNLHTITDACSCCVFLKTWAAICRGDSDDEISWPDFSSAFSLFPPRDTSGMRAGVLLGSKTAKCSVRRFLFNEKAINNLRTESKDDPTPTRYQVLSSFICKHMVLASRQKTMAVALHIVDIRRRMGDPFSKNSMGNLLWPAMVVYDRINSNTQIKDLVRTMREKMGKINRELFLRMQGDPNFLKSDECAELLLEGIEKKKPSCFVFASWGNLGFDKVDFGWGKPLWVGVRGGNQESVPNTVVITETKGGIEAWVTMEEEDIAALEEDKGFLRFALLNPSVSNI 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0824 425 Gene3D - 203 412 IPR023213 -
Glsi12g0824 425 Gene3D - 1 195 IPR023213 -
Glsi12g0824 425 PANTHER F21J9.9 5 416 - -
Glsi12g0824 425 Pfam Transferase family 3 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0824 Glsi-ChrGlsi12 25806786 25809831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0824 2 408 Monolignol Biosynthesis Gene Families AT5G48930 23.266 7.32e-18 83.6