Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0818 ATGGTCACCGCAGCACAGCTACCGCCGCCTTCGCCGGCACTCGAACCCGCCACCACAATACCGGAATCCACTACAGTGGGCCACACTCTCTTCTCCTGCGTCCGTCTCGCCACTCCGCCCGACGTCCCTCACATCCACAAGCTCATCCACCAGATGGCCGTCTTCGAGAACCTCACCCACCTATTCTCCGCCACCGAGTCCTCTCTCTCCTCCACCCTCTTCAACTCCCACCCTTTCCAGTCCTTCACCATATTCATCCTCGAAGTCTCCCCCAAGCCCTTCTCGGAGACTCAGTTCGCCGATAACCCGTTCTACACGCCCACTGTTCGGATGGTGAACCTGGACCTTCCGATCGATGACCCAGAAATAGAAACGTTTCGTTCAGAAGTCGCTGATGGTGATGTTTTGGTTGCTGGCTTCGTGCTGTTCTTCCCCAGTTTCTCCCCGTTTCTGGGAAAACCTGGATTTTATATAGAGCACCTGTTTGTGAGAGAGTGCTATAGGAGGAAAGGGTTTGGGAGGATGCTGCTTTCAGCGGTGGCGAAGCAGGCGGTGAAGATGGGCTACGGGAGGGTGGATTGGATTGTGCTGGATTGGAATGTAAATGCAATCAAGTTCTACGAAGAAATGGGTGCTAAGATCTTGCATGAATACAGGTTTTGCAGGTTAACTGGCGAGGCTCTCCAAGCTTACGAGACTGCTGATTGA 708 0.5381 MVTAAQLPPPSPALEPATTIPESTTVGHTLFSCVRLATPPDVPHIHKLIHQMAVFENLTHLFSATESSLSSTLFNSHPFQSFTIFILEVSPKPFSETQFADNPFYTPTVRMVNLDLPIDDPEIETFRSEVADGDVLVAGFVLFFPSFSPFLGKPGFYIEHLFVRECYRRKGFGRMLLSAVAKQAVKMGYGRVDWIVLDWNVNAIKFYEEMGAKILHEYRFCRLTGEALQAYETAD 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0818 235 CDD NAT_SF 130 192 - -
Glsi12g0818 235 FunFam probable acetyltransferase NATA1-like 32 234 - -
Glsi12g0818 235 Gene3D - 33 235 - -
Glsi12g0818 235 Pfam Acetyltransferase (GNAT) family 134 211 IPR000182 GO:0016747
Glsi12g0818 235 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 34 226 IPR016181 -
Glsi12g0818 235 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 84 235 IPR000182 GO:0016747
Glsi12g0818 235 PANTHER DIAMINE N-ACETYLTRANSFERASE 34 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0818 Glsi-ChrGlsi12 25733626 25734333 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi12g0818 Acetyltransf_1 8.6e-13 CL0257