Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0816 ATGCCGTACCAGAGAAAAAGGATTTCCAAATTCCCTAATGACCCCCCAGCGGACGTTAGCCCCAACCCCAACTTCAACCTCTCGATGTGCAAGTCCAAAAGAAGCACTAACGTGATCGAACCTAGGAGCCACCATCGATCTCGCGCCTCCACTCTTTCTTCCACCGCCAATCTTCCTCCCACTTCTTCTTCCTTCACCAATTTCACCACCACGGATTCTACAAGCTACTACTACAAGGAGTGGTCCAAAGCCTCCACTGCTTCTAGCCACGCCTCCCTCTCTAGCCTCAAGGATTCATTACCTGAGAACCCCCACATCTACGAGTTCTCCGAGATTTCCTCCGCCACTCAAAATTTCCATGCGAATAAGTTCTCATCATCTTCCTCCTCGTCGTCTTGGCGATGCTCCATTCGTGACAAGGAGGTTGTGGTTTTCCAGCGGAAGTTTCGCCGCCCTATGGAGTTGCCGGAACTCCGGGATCGGCTGGCTGTGATTTGTCTGAGCCACCATAGTAGCTTGATTAAACTCCTCGGGGCATCGGTTTCTGGGAACTACATTTATCTGGTGTATGAGTTTGTTCGCGGTGCGAATCTCGCTGAGTGTCTTCGAAATCGGATTAACCCCGGCTTCACTAATCTATCAACGTGGCTTTCCCGAATGCAAATCGCCACCGACATCGCTCACGGCCTTGATTACATCCACCATTTCTCGGGCCTGAACTCGAATTTCGTCCATAACCACATCAAGAGCTCCAGTATCATCGTCACGGAGGAGAATTTGAGCGCGAAAATTTGCCATTTCGGGACCTCGGAATTGTGCGGCGAAGCCGCTTCCGAAACCCCGTCTGATTCCGATTCTGCCAAATTCAAGGAGATAAAGAGATCCGGTAGCCGGAGGGTGAAATTAGAAGGGACGAGAGGGTACATGGCGCCGGAGTATCCAGCCACGGGGGTTGCGACGCAGAAATCGGATGTGTTCGCATTTGGGGTCGTGCTCTTGGAGCTCCTGAGTGGGGAAGAGGCGTTGAAGTACGAGTTCGAGGACAGCGGCGCGTATAGAAGGGTGAGTGTGATGGATTCAGCGAGGGTGGCTCTGGCAGAAGACGGTGGTGCGAGAAAGTGGGTGGATAGGAGGTTGAAGGATTCGTTCCCGGTGGAAGTGGCGGAGAAGATGATTCGGCTCGGGTTGGAATGCGTGGAGCACGATCCGAGAGAGAGGCCGGATATGGGTCAGGTGGCGGGTTCGATATCAAAATTGTATTTGGATTCTAAGAGTTGGGCAGAGAAGATGGGAACAGCTATTGACTTCTCAATCTCATTGGCACCTAGGTGA 1332 0.5225 MPYQRKRISKFPNDPPADVSPNPNFNLSMCKSKRSTNVIEPRSHHRSRASTLSSTANLPPTSSSFTNFTTTDSTSYYYKEWSKASTASSHASLSSLKDSLPENPHIYEFSEISSATQNFHANKFSSSSSSSSWRCSIRDKEVVVFQRKFRRPMELPELRDRLAVICLSHHSSLIKLLGASVSGNYIYLVYEFVRGANLAECLRNRINPGFTNLSTWLSRMQIATDIAHGLDYIHHFSGLNSNFVHNHIKSSSIIVTEENLSAKICHFGTSELCGEAASETPSDSDSAKFKEIKRSGSRRVKLEGTRGYMAPEYPATGVATQKSDVFAFGVVLLELLSGEEALKYEFEDSGAYRRVSVMDSARVALAEDGGARKWVDRRLKDSFPVEVAEKMIRLGLECVEHDPRERPDMGQVAGSISKLYLDSKSWAEKMGTAIDFSISLAPR 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0816 443 Gene3D Transferase(Phosphotransferase) domain 1 195 435 - -
Glsi12g0816 443 Pfam Protein kinase domain 163 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0816 443 ProSiteProfiles Protein kinase domain profile. 118 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0816 443 MobiDBLite consensus disorder prediction 1 64 - -
Glsi12g0816 443 MobiDBLite consensus disorder prediction 48 64 - -
Glsi12g0816 443 MobiDBLite consensus disorder prediction 20 36 - -
Glsi12g0816 443 SUPERFAMILY Protein kinase-like (PK-like) 125 413 IPR011009 -
Glsi12g0816 443 Gene3D Phosphorylase Kinase; domain 1 78 192 - -
Glsi12g0816 443 PANTHER OS09G0572100 PROTEIN 29 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0816 Glsi-ChrGlsi12 25713477 25714984 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0816 102 426 Receptor kinase-like Gene Family AT1G51940 33.333 1.21e-44 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Glsi12g0816 Pkinase 4.8e-24 CL0016