Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0814 ATGTCTGAGTCTAAGACGAGCTCCAAGATTTTCTGGTCATTCCTTTGGTTAGCCATTGTGGTTTGTTTGAGTTTGTTCCATGCAATACAGTGCCAAGAAATGAATGACTACGACCAAATCGACAACCCAGCTGTTCTTCCGCTTATTACGCAGCTTGTGTACAGTCGAATTTCCAATTTGACCTCGGTTCTCAGTCAGGAAATCAGCAGCCAGTCCAGTTTCTGCGTCAAAGATCCGGAAGCTGACTGGAACCAGGCATTTAATTTCTCATCTGATTTGGACTTCTTGACTTCTTGCATTCGGAAGACTAAAGGAGACATCACAAAACGCTTGTGTACAGCAGCAGAAATGAAATTTTACTTTAGCAGTTTCTTTGAGAGATCAACAAGTGCCAATTACTTAAAGCCTAACAAGAATTGCAATTTAACCTCATGGGTCTCCGGCTGTGAGCCAGGATGGGCCTGTAGTGTTGGCCCAAAACAGCAGGTTGACCTTCAAAACTCAAAGGAGATGCCTGCAAGAACTACAAACTGTCAAGCATGCTGTGAGGGCTTCTTCTGTCCTCATGGTATCACATGCATGATACCTTGCCCACTAGGTTCCTACTGCCCTCGTGCAAAACTTAATGAAACAACTGGTGTATGTGAACCATATCTTTACCAATTGCCTCCAATGCAGCCAAATCATACATGTGGAGGAGCAAATATTTGGGCTGATGTTAGTAGCAGTATGGAGATATTTTGTTCAGCAGGATCATATTGCCCAACAACCACCAAAAGAATCCCTTGCAGGAGTGGACATTATTGCAGAATGGGTTCTACATCTGAGAAAAGATGCTTCAAGCTGAGTTCATGTAATTCAAACACAGCGACCCAAAATATGCATGCATATGGAATTATGCTCATCGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTGTTCTGACCAAGTTCTCACTACTAGGGAAAGGAGAGTTGCTAAATCCAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACTGCAAATGCACGCCAAAGATGGAAATCTGCAAAAGATGCTGCTAAGAAGCGTGCAAGTGGGCTGCAAACTCAACTATCACGTACATTTTCTCGTAAGAAAGAAGCATCACATCTAGACAAATTTCAAATTGTGGATCAAGGAGCTTCTGAAACAGATATCGAATTGCTGTCACCTTCAAGCATGGCTGTAAATTCATCTGCAGTACCAAAGGAAATGGGAAAAGAACCCAGTGATCTGATGCAGATAATGCGTGAGATAGAAAATGACCCAGACATTGATGAAAACCTCAATATAGAAACTAGAGAAAAAAGAAACATTCCCAAGGGAAAACAACTGCATTCTCATAGCCAAATTTTTAAGTATGCATATGCTCAACTTGAAAAAGAGAAGGCTCAGCAACGACAAAACAAGAACCTTACCTTCTCAGGAGTAATTAAAATGGCTACCAACAGTGAACAGAGAAAAAAGAGGCCTTTAATTGAGATATCTTTCAAAGATCTGACTCTCACTTTGAAAACACAAAACAAGCATATATTGAGATACGTGACAGGTAAAATTAAACCTGGCCGCATTACAGCTGTCATGGGTCCATCAGGTGCAGGCAAGACAACATTTCTTTCAGCTCTGGCAGGGAAAGCATTAGGATGCACACTTACTGGTTCAATTCTTATAAATGGAAAGAATGAATCAATCCACTCCTACAAGAAAATTATTGGCTTTGTACCACAAGATGATATAGTTCATGGAAACCTGACAGTGGAAGAGAACCTCTGGTTCAGTGCACAGTGCAGGTTGTCTGCTGACTTGTCAAAACCAGATAAAGTTCTGGTTGTTGAAAGAGTTATTGAATTTTTGGGGCTTCAGTCAGTGCGGAATTCCTTGGTTGGAACTGTGGAAAAGAGAGGAATTTCCGGAGGCCAAAGGAAACGTGTAAATGTTGGGTTGGAGATGGTAATGGAACCTTCACTTTTGATCTTGGATGAACCCACATCTGGTTTGGACAGCGCCTCATCTCAGCTCCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTAAACATTTGCATGGTGGTACACCAACCCAGCTATGGCTTATTCAAGATGTTTGATGACTTGATCCTTCTGGCAAAAGGAGGCCTTACTGTCTATCATGGATCAGTGAAGAAAACTGAAGAGTACTTTGCAGGACTTGGGATCAATATCCCAGAAAGGATCAATCCTCCAGACTACTTCATTGACATTTTGGAGGGTATAGCAGTACCTGGGGGAAGAACAGGAGTCAGCTATAAAGAGCTGCCAATTAGATGGATGCTTCATAACGAATACCCAGTACCTCTTGATATGAGGCAGAATGCAGAAAAATTTGATGCACCTTCCCATAGTGTAAACCCAGCTAATGAAATAGATTTTAATGGTTCTGGTCATAAGCAGAAATCCTTTGCTGGAGAATTATGGCAAGATGTAAAACACAATGTGGAACTGCAGGGAGAGAAGATTCGACTCAATTTTTCTAAGTCCAAGGATTTGTCTAACCGGAAAACTCCTGGCGTGTTTAAGCAATATAAGTACTTCCTTATAAGGGTTGGTAAGCAGAGATTAAGGGAAGCTAGGATTCAAGCCATAGATTACCTGATTTTATTACTTGCTGGGGCCTGCTTAGGATCGCTTACTAAAACCAGTGAACAAACCTTTGGTGCAGCAGGGTACACCTACACAGTGATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCATTCTCTCTGGATAAATTACACTACTGGAGGGAGAGTGATTCTGGCATGAGCAGCTTGGCTTATTTTCTGTCTAAAGACACAATTGATCATTTTAACACAGTAATCAAGCCTCTGGTGTACCTCTCCATGTTCTATTTCTTCACCAATCCAAGATCTACTTTTGCAGATAATTACATTGTGCTGCTCTCTCTTGTATTCTGTGTGACTGGCATAGCATATGCATTGGCCATGTACTTCGAACCTGGTGCAGCCCAGCTATGGTCGGTGCTTCTCCCAGTTGTTTTGACACTCATTGCAACACAACAAAAAGATAGTAAGATTTTGAAGGGTGTAGCTAATTTATGCTATCCTAAGTGGGCTTTGCAAGCATTTGTAACTGCAAATGCTGAAAGGTATCACGGGGTGTGGCTCATAACTCGTTGCGGTTCACTAATGAAAAGCGGCTATAATCTTCATGATTGGAATTTGTGTGTATTAATCCTCTTGTTAATAGGCATAATTAGTAGGGCAATAGCATTTTGCTGCATGGTCACCTTCCAAAAGAAGTAA 3336 0.4167 MSESKTSSKIFWSFLWLAIVVCLSLFHAIQCQEMNDYDQIDNPAVLPLITQLVYSRISNLTSVLSQEISSQSSFCVKDPEADWNQAFNFSSDLDFLTSCIRKTKGDITKRLCTAAEMKFYFSSFFERSTSANYLKPNKNCNLTSWVSGCEPGWACSVGPKQQVDLQNSKEMPARTTNCQACCEGFFCPHGITCMIPCPLGSYCPRAKLNETTGVCEPYLYQLPPMQPNHTCGGANIWADVSSSMEIFCSAGSYCPTTTKRIPCRSGHYCRMGSTSEKRCFKLSSCNSNTATQNMHAYGIMLIAALSTLLLIIYNCSDQVLTTRERRVAKSREAAARSARKTANARQRWKSAKDAAKKRASGLQTQLSRTFSRKKEASHLDKFQIVDQGASETDIELLSPSSMAVNSSAVPKEMGKEPSDLMQIMREIENDPDIDENLNIETREKRNIPKGKQLHSHSQIFKYAYAQLEKEKAQQRQNKNLTFSGVIKMATNSEQRKKRPLIEISFKDLTLTLKTQNKHILRYVTGKIKPGRITAVMGPSGAGKTTFLSALAGKALGCTLTGSILINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSADLSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQLLLRALRREALEGVNICMVVHQPSYGLFKMFDDLILLAKGGLTVYHGSVKKTEEYFAGLGINIPERINPPDYFIDILEGIAVPGGRTGVSYKELPIRWMLHNEYPVPLDMRQNAEKFDAPSHSVNPANEIDFNGSGHKQKSFAGELWQDVKHNVELQGEKIRLNFSKSKDLSNRKTPGVFKQYKYFLIRVGKQRLREARIQAIDYLILLLAGACLGSLTKTSEQTFGAAGYTYTVIAVSLLCKIAALRSFSLDKLHYWRESDSGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFFTNPRSTFADNYIVLLSLVFCVTGIAYALAMYFEPGAAQLWSVLLPVVLTLIATQQKDSKILKGVANLCYPKWALQAFVTANAERYHGVWLITRCGSLMKSGYNLHDWNLCVLILLLIGIISRAIAFCCMVTFQKK 1111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0814 1111 Pfam ABC-2 type transporter 701 1111 IPR043926 GO:0140359
Glsi12g0814 1111 ProSitePatterns ABC transporters family signature. 644 658 IPR017871 GO:0005524|GO:0016887
Glsi12g0814 1111 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 250 1098 - -
Glsi12g0814 1111 Pfam ABC transporter 522 672 IPR003439 GO:0005524
Glsi12g0814 1111 CDD ABCG_EPDR 501 727 - -
Glsi12g0814 1111 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 503 745 IPR003439 GO:0005524
Glsi12g0814 1111 SMART AAA_5 529 721 IPR003593 GO:0016887
Glsi12g0814 1111 FunFam ABC transporter G family member 24 497 739 - -
Glsi12g0814 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 503 732 IPR027417 -
Glsi12g0814 1111 Gene3D - 488 741 IPR027417 -
Glsi12g0814 1111 MobiDBLite consensus disorder prediction 332 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0814 Glsi-ChrGlsi12 25685595 25697951 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0814 498 704 Calmodulin-binding Proteins AT2G36910 27.830 3.55e-13 72.4