Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0810 ATGAAGAACTCTGTCTCATCAGATCACAGTTTTTACATCGAAAGTGATGAAGAAGACGAGGAAAAGGATCTTAACAAAGGGGAAGATGATGGGAACGATTCAGATTCTTCCAATTATTCAAATGAAAACCAGCAACAGAACAAACCCAGTTCGTACAACGTCTCATGGCCTCAGAGTTACAGGCAGTCTATTGATCTATACAGTAGTGTACCATCACCAAATATCGGATTTCTAGGCACTCCCTCATTGTCAAGATTAAGTAGTTCCTTTCTTTCTTCATCTTTAACAAAGAGGCACACTCCTGAAACGCTACCTTCAGTAGCGAAACCTCTGTTAGAGCCAACAGCTGATGAGCAACAAAGGCGTAGCTCTCAATCTTTGCTACCTCCTCTTCGATCTAGGAGGTCTCTGAGTAGGAAGGATGTTTCCAAGGTTTCTCATGAAGTTCCAATTTCTCGCCAATGCTCTTATGGACAAGCTGTGCTTAATGGTATAAATGTTCTCTGTGGGGTAGGAATTCTTTCTACCCCTTATGCTGCCAAAGAGGGTGGATGGCTTGGGCTTTCTATTTTGTTAATTTTTGCAGTTCTTTCCTTTTATACTGGGATCCTTTTGCGTCACTGCTTGGATAGTGAACCGGGGCTTGAGACATATCCTGACATTGGCCAAGCTGCTTTTGGTTCTGTAGGACGTATTGCCATCTCGATAGTATTGTACGTGGAACTATATGCCTGTTGCATAGAATATATAATTTTGGAGAGCGACAACTTGTCTTCATTATTTCCTAATGCACACATAAATTTGGGTGGAATTGAATTGAATTCACACATTCTGTTTGCACTGTTGACCACCTTGGCTGTTCTTCCTACTGTTTGGCTCCGTGACCTAAGCATTCTCAGTTACATCTCAGCTGGTGGAGTTATTGCATCAATTTTGGTATCCCTCTGCTTGTTGTGGGTTGGCTTGGTAGATGGAGTTGGATTTGAGAACAAAGGGACACCACTGAATCTTGCAACTCTTCCTGTTGCTTTGGGCGTTTATGGTTACTGCTATTCAGGACACGCTGTGTTCCCAAACATCTATACATCAATGGCAAACCCAAACCAATTCCCTGCAGTCTTATTAGCATGTTTTTGTATTTGTACTTTGTTGTATGCTGGAGTGGCTGTTATGGGGTACACAATGTTTGGAGAATCTACACTTTCTCAGTTCACTCTTAATCTGCCCCAAGATTTTGTGGCCACCAAGGTTGCTGTGTGGACTACGGTGGTCAATCCATTTACCAAATATCCTTTAAAATCTATATTTGATTTATAG 1317 0.4176 MKNSVSSDHSFYIESDEEDEEKDLNKGEDDGNDSDSSNYSNENQQQNKPSSYNVSWPQSYRQSIDLYSSVPSPNIGFLGTPSLSRLSSSFLSSSLTKRHTPETLPSVAKPLLEPTADEQQRRSSQSLLPPLRSRRSLSRKDVSKVSHEVPISRQCSYGQAVLNGINVLCGVGILSTPYAAKEGGWLGLSILLIFAVLSFYTGILLRHCLDSEPGLETYPDIGQAAFGSVGRIAISIVLYVELYACCIEYIILESDNLSSLFPNAHINLGGIELNSHILFALLTTLAVLPTVWLRDLSILSYISAGGVIASILVSLCLLWVGLVDGVGFENKGTPLNLATLPVALGVYGYCYSGHAVFPNIYTSMANPNQFPAVLLACFCICTLLYAGVAVMGYTMFGESTLSQFTLNLPQDFVATKVAVWTTVVNPFTKYPLKSIFDL 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0810 438 Pfam Transmembrane amino acid transporter protein 155 432 IPR013057 -
Glsi12g0810 438 PANTHER OS05G0424000 PROTEIN-RELATED 164 436 - -
Glsi12g0810 438 MobiDBLite consensus disorder prediction 1 55 - -
Glsi12g0810 438 MobiDBLite consensus disorder prediction 34 55 - -
Glsi12g0810 438 MobiDBLite consensus disorder prediction 94 141 - -
Glsi12g0810 438 MobiDBLite consensus disorder prediction 117 132 - -
Glsi12g0810 438 FunFam Amino acid transporter AVT1A 153 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0810 Glsi-ChrGlsi12 25641073 25647500 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0810 3 432 Amino Acid or Auxin Permease AAAP Family AT2G39130 74.371 0.0 659
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0810 12 25641073 25647500 Glsi12g0810 12 25641073 25647500 ECH