Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0788 ATGGTGGTTTCTGGGCTCCAAGGCAGAACACGAGGAGGAACTCAATGGGAAAACGCAAAAACTTTCACTCTCCAAGTCCTCACGGGGAGATGGTTCATGGTTTTCTCCTCATTCCTTCTCATGTCAGTCTCTGGAGCTAGCTACATGTTCGCCCTTTACTCCATAGAGATCAAATCAGTCCTTGGCTACGACCAATCAACCCTCAACCTCCTCAGCTTCTTCAAGGATCTTGGCGCCAACATAGGCATTCTTTCTGGCCTCATCAACGAGGTCACCCCCCCTTGGGTGGTCCTGTCTCTTGGTGGGCTCCTAAACTTTTTTGGGTACTTCATGATTTGGCTTTCTGTCACCAGAAAAATAGCCAAACCCAGTGTTTCGGTCATGTGCTTCTTCATCTTCGTAGGAGGAAACTCCCATTGTTCCACCAATACAGGAGCTGTGGTCACTAGCGTGAAGAATTTCCCAGGAAGCAGAGGAATTGTTATAGGACTTTTATATGGGTATTTGGGTTTGAGTGGAGCTATTGTCACTCAATTATACTATGCTTTCTATGGAAATGATTTCAAGTCTCTGATTTTGCTCATGGCTTGGCTTCCTACTGCTACTTCTTTTGCCTTTTTACCAGTTATAAGGCACCATATGGGAATTCAGCAGAAAAATGACACCAAAACTTTCTATAAGTTTCTCTATTTGAGCCTTGTTCTTGCAGGCTTTCTTCTGATCATAATTGTAACGGAACAGTGCTTTAACTTCACTAAGAGTGAGTACTATGTTACTTCTTCTGCTATGCTTCTCTTGCTTGTTCTCCCTATTGTAGTTGTAATAATGGAGGAGCATAGGATTTGGAAGACCAAGCAAGAAGTCATCAATGGAGGAACTCATCTGAAAATCACAACAGAGAAGCCTAACAAAGAGAATTCTGCAGAAACATTCAAAGCAGATCAGATCATCACTACCCATGAACAAGTTTCCTGCTGGAAAACCATACTGAGGCACCCAAATAGAGGCGAAGACTATACTATACTACAGGCAATTTTCAGCCTAGACATGGTGATTCTGTTTACGGTTACAATATGTGGGATAGGGGGTAACCTGACAGTGGTGAACAACTTGAGCCAGATAGGGATAGCTTTAGGATACCCTCCACATAGCATAACGACATTTGTTTCTCTCATGGCAATTTGGATCTATTTAGGGAAAGTAACACAAGGGGTCATCTCAGAGTACATCATAACCAAGCTCAAAGCGCCTAGGCCTCTCATGATCACATCAATTCTTATACTTTCATCTGTAGGACACCTTTTGGTTGCCTTCAATGTCCCAAATGGTCTCTATGTGACCTCCATAATCATAGGCTTCTGCTTTGGGGCAAACTGGCCTGTACTCTTCTCCATCATATCAGAACTCTTCGGCCTTAAGTATTACTCTACCCTTTATAACGTAGGGTCAGTGGCTAGCCCTATTGGGGCATACCTACTAAGTGTGAGAGTTGCAGGGCATTTGTATGATAAAGAAGCAAAGAGGCAAATGGCAGAAATGGGGCTGGTGAGAACACCAGGAGAGGTATTGAACTGCAATGGGGGTGAGTGCTATAGATTGGCCTTCATTATTATCACTGCAGTGGCTTTGTTTGGGGCACTGATGTCCTTAATTTTGGTGGTTAGGACTAGAAGCTTCTACAGAAGTGATATTTACAAGAAGTTCAGAGAGGAGAACAATAGAGCTGCTAATGAGATAGAAATGGATTTGTATGAACAGCCTGAGCCACCTGATGCTAGCTAG 1782 0.4338 MVVSGLQGRTRGGTQWENAKTFTLQVLTGRWFMVFSSFLLMSVSGASYMFALYSIEIKSVLGYDQSTLNLLSFFKDLGANIGILSGLINEVTPPWVVLSLGGLLNFFGYFMIWLSVTRKIAKPSVSVMCFFIFVGGNSHCSTNTGAVVTSVKNFPGSRGIVIGLLYGYLGLSGAIVTQLYYAFYGNDFKSLILLMAWLPTATSFAFLPVIRHHMGIQQKNDTKTFYKFLYLSLVLAGFLLIIIVTEQCFNFTKSEYYVTSSAMLLLLVLPIVVVIMEEHRIWKTKQEVINGGTHLKITTEKPNKENSAETFKADQIITTHEQVSCWKTILRHPNRGEDYTILQAIFSLDMVILFTVTICGIGGNLTVVNNLSQIGIALGYPPHSITTFVSLMAIWIYLGKVTQGVISEYIITKLKAPRPLMITSILILSSVGHLLVAFNVPNGLYVTSIIIGFCFGANWPVLFSIISELFGLKYYSTLYNVGSVASPIGAYLLSVRVAGHLYDKEAKRQMAEMGLVRTPGEVLNCNGGECYRLAFIIITAVALFGALMSLILVVRTRSFYRSDIYKKFREENNRAANEIEMDLYEQPEPPDAS 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0788 593 CDD MFS_Mch1p_like 29 546 - -
Glsi12g0788 593 Pfam Nodulin-like 30 275 IPR010658 -
Glsi12g0788 593 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 31 565 - -
Glsi12g0788 593 SUPERFAMILY MFS general substrate transporter 31 558 IPR036259 -
Glsi12g0788 593 Gene3D MFS general substrate transporter like domains 344 561 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0788 Glsi-ChrGlsi12 25198849 25200630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0788 20 571 Nodulin-like Gene Family AT2G39210 59.677 0.0 700
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0788 12 25198849 25200630 Glsi12g0788 12 25198849 25200630 ECH
Glsi11g1002 11 6326764 6329003 Glsi12g0788 12 25198849 25200630 ECH