Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0768 ATGGGTCGCGAAACCTTGCCCCTGCCAGCTCCACCAACCCCAGCCACAACACCCAACCCACCGGCACCAGTATCAGCAGCAGCAGCTCCTCCTACATCACTTGCTCCTGGGTTTCGCTTCCACCCAACTGATGAGGAGCTGGTTATTTACTACCTCAAGCGCAAGGTCTCTGGAAAAAGCTTCCGATTTGATGCCATCTCTGAGGTGGACATATACAGGAGCGAGCCTTGGGACCTAGCAGATAAGTCGAGATTGAAGACGAGGGACCAAGAATGGTATTTCTTTAGTGCATTGGACAAGAAATACGGTAATGGAGGGAGGATGAACAGGGCTACGAGCAAAGGGTACTGGAAAGCAACAGGGAATGATCGCCCTGTTAAGCATAATCAAAGGACCGTGGGGCTGAAGAAAACTTTGGTCTTTCATAGTGGTCGGGCTCCAGATGGTAAGCGTACCAATTGGGTTATGCATGAGTACAGGCTTGTTGATGACGAGCTGGAAAAAGCTGGAACTGGATCCACACAGGATGCATATGTTCTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCGAATGGGCAACGATATGCACCTTTCATTGAGGAGGAATGGGATGATACATCGACACTGATTCCAGGAGCAGAGCCTGTAGATGAAGTTCCAGCCGTTCGACGTCCACGTATTGAAGGAAACTGTCATGTTGGATGTATTGAAGGGAGTAATGTTGTACAGGATACTCAATCCATCAATAAGGCTCCTTTAGATGTGAATAAGCTTCCAATAGAAACTCAAAATCTTCTAGCTGTCTGTAAGAGGGAGAGTATGGCCGAGTACCCATCGCCAGAAAAGGATAATTCTAAGTCTATGGACGAGTACCCTTCACCACAAACAGATAATCCGAAGCCTTTCTCACAAATATACAAAAGAAGGCGGCATAATTTGAATTCCAGTCATTCTAATGCTCCCGAGCCTTCAACTCAAAACAGCCAGGACCCAAGCTCATCTACCATAACAACTGCAGCAACAACACTGCCAACTACAACCACTACCACCACCACTACCAGCAATTCGTCGAGAAAACACTTTTTGTCTGCATTGGTGGAATTTTCTCTGCTAGAATCTCTTGAACCAAAGGAAAGTCCTCCAGTTCAGTCACTGGAATTTGATGCTGCTAATATCGACTCATCCCTGCCAGCCAGCTGCTTAAAGTTCATCCAACAATTGCAGGGTGAGGTTCGCAAGCTCTCGGTCGAAAGGGAGACTATGAGGTTTGAGATGATGAGTGCCCAAGCCATGATAAACATTCTCCAATCTCACATCGACAATCTGAACAAAGAGAATCAAGAGTTGAAGAGGAGCTCTCAAGATCATTAG 1377 0.4641 MGRETLPLPAPPTPATTPNPPAPVSAAAAPPTSLAPGFRFHPTDEELVIYYLKRKVSGKSFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVKHNQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDDELEKAGTGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDDTSTLIPGAEPVDEVPAVRRPRIEGNCHVGCIEGSNVVQDTQSINKAPLDVNKLPIETQNLLAVCKRESMAEYPSPEKDNSKSMDEYPSPQTDNPKPFSQIYKRRRHNLNSSHSNAPEPSTQNSQDPSSSTITTAATTLPTTTTTTTTTSNSSRKHFLSALVEFSLLESLEPKESPPVQSLEFDAANIDSSLPASCLKFIQQLQGEVRKLSVERETMRFEMMSAQAMINILQSHIDNLNKENQELKRSSQDH 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0768 458 MobiDBLite consensus disorder prediction 1 37 - -
Glsi12g0768 458 MobiDBLite consensus disorder prediction 7 27 - -
Glsi12g0768 458 ProSiteProfiles NAC domain profile. 34 186 IPR003441 GO:0003677|GO:0006355
Glsi12g0768 458 SUPERFAMILY NAC domain 26 187 IPR036093 GO:0003677|GO:0006355
Glsi12g0768 458 FunFam Nac domain-containing protein 86 43 189 - -
Glsi12g0768 458 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 33 328 - -
Glsi12g0768 458 MobiDBLite consensus disorder prediction 273 359 - -
Glsi12g0768 458 Gene3D NAC domain 43 189 IPR036093 GO:0003677|GO:0006355
Glsi12g0768 458 MobiDBLite consensus disorder prediction 318 359 - -
Glsi12g0768 458 Coils Coil 406 457 - -
Glsi12g0768 458 Pfam No apical meristem (NAM) protein 36 161 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0768 Glsi-ChrGlsi12 24701474 24706851 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0768 1 232 NAC Transcription Factor Family AT3G10480 59.774 3.68e-102 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi12g0768 NAM 1.8e-36 No_clan