Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0766 ATGGGTCGTGATTCTGCAACATCTCTCGCTCCCGGATTCCGATTCCACCCCACTGACGAAGAACTCGTTCGTTACTACCTCAGGCGCAAGGTCTCCGGCAAAGCCGTTCGGTTCGACCTAATTGGGGTCATCGATGTCTACAAATCCGAGCCTTGGGACCTCCCCTGTCAGTCGAAGTTGAAGAGCAGGGACTTGGAGTGGTACTTCTTCAGTGTGCTAGACAGGAAGTACGGAAATGGGTCTAGGACGAATCGGGCGACTGAGAAAGGGTACTGGAAGACTACGGGGAAGGATCGCTCAGTACATCATAAATCCCGAGTTGTCGGAATGAAGAAGACCCTGGTTTTTCATAGTGGCCGGGCACCGCGTGGTACTCGTACAAATTGGGTCATGCATGAGTACAGAATGGCTGATGAAGAATTGGTGAACGCTGGAATAGCTCAGGATGCTTTTGTGCTCTGTAGGGTTTTCCAGAAGAGTGGTACAGGGCCAAAGAATGGGGAGCAATACGGTGCCCCCTTTCTAGAGGAGGAATGGGAAGATGATGATGCGTTGGCTCCAGTGGGTGAAGGGGCTGTGACTGATGAAGTGTTAATTAGCGATGATGCTTTTGTTGAAACAAACGACCTTGAGCAGAACCTTGATATGGGCACAACATCTGAAAGTGCTGGTCTTCCATTAAACTTTTATTATGGAGAGACTAGTAGCTATCCTGAGTATTCCCAGGAATTCATTGAAGACCAGAAGCCCTTGGTAAGAACTATTGGAACTTCTGATCCTCATGAGGACCAGCACTTGAATATGCCTGAGCAGTATGCAACGGACAGCAAAACAGTGCAAAATGAATACAATGGTGAAGCAAGCCAAGATGGAAATACCCTAAATTTCAATTATGCACTTGATGAGCCGTACTTGGATGCTTTTGATTATCCTCTGGTTGATGATGGATCATTCCTGGAAACCAATGATCTTGCAAATCCCATTGAGGCAGATCCTGATGGTATTGGCATGCTCGAAGAGTATCTTACATACCTGGATGCTGATGATGATATTTCCAAGTATATATCTTTTGATTCTCCTCAGATTAATGGGAGTGAAGACTCTATTCCTGACCAAGAACAGAATGTAGATGAAGAAACCAAGGTTCCTTCCATGGCAAGCAAACAGGATCTCAAAGCACATGGTAACAATGAAGCTTCCTCTTCTAAGCAGAATTCAGAGGCATCAAAATTTGTGTCAGGAAATACATATCCATTTCTAAAGCAGGCCAGTCACTTGTTGGGCAGTATCCCTGCTGCTCCCGCATTTGCTTCAGAGTTTCCTCCTAATGATATTGCTCTTCGGCTTCATTCTGCAGCTCAGTCTTCCAATGCAGATCATATAACTGCAGGTATGATAAGAGTAACAAATATTACTCTAAGAGGCAATGAGATGGACTGGATGCGAGGCAAGAATGGAGACTTCAACTATGTTATCTCGGCAGGCTTTCCTCAACCTGATGTTAATTCTGCTGCTTTAGTGCCTGTTTCTAGTTTGCTTTCTGGCAAAACTGCATTTATGGTGTCACATGGCTGGATTTTCTTAATCTTCTTTTCGATTCTGATTCTTCCATTGATTTGCAAGATTGGTAGTTTCATGCATACTGGTAAATGA 1653 0.4483 MGRDSATSLAPGFRFHPTDEELVRYYLRRKVSGKAVRFDLIGVIDVYKSEPWDLPCQSKLKSRDLEWYFFSVLDRKYGNGSRTNRATEKGYWKTTGKDRSVHHKSRVVGMKKTLVFHSGRAPRGTRTNWVMHEYRMADEELVNAGIAQDAFVLCRVFQKSGTGPKNGEQYGAPFLEEEWEDDDALAPVGEGAVTDEVLISDDAFVETNDLEQNLDMGTTSESAGLPLNFYYGETSSYPEYSQEFIEDQKPLVRTIGTSDPHEDQHLNMPEQYATDSKTVQNEYNGEASQDGNTLNFNYALDEPYLDAFDYPLVDDGSFLETNDLANPIEADPDGIGMLEEYLTYLDADDDISKYISFDSPQINGSEDSIPDQEQNVDEETKVPSMASKQDLKAHGNNEASSSKQNSEASKFVSGNTYPFLKQASHLLGSIPAAPAFASEFPPNDIALRLHSAAQSSNADHITAGMIRVTNITLRGNEMDWMRGKNGDFNYVISAGFPQPDVNSAALVPVSSLLSGKTAFMVSHGWIFLIFFSILILPLICKIGSFMHTGK 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0766 550 SUPERFAMILY NAC domain 7 159 IPR036093 GO:0003677|GO:0006355
Glsi12g0766 550 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 345 - -
Glsi12g0766 550 ProSiteProfiles NAC domain profile. 9 159 IPR003441 GO:0003677|GO:0006355
Glsi12g0766 550 MobiDBLite consensus disorder prediction 390 407 - -
Glsi12g0766 550 FunFam Nac domain-containing protein 86 18 162 - -
Glsi12g0766 550 Gene3D NAC domain 18 162 IPR036093 GO:0003677|GO:0006355
Glsi12g0766 550 MobiDBLite consensus disorder prediction 357 407 - -
Glsi12g0766 550 Pfam No apical meristem (NAM) protein 11 136 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0766 Glsi-ChrGlsi12 24646245 24649815 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0766 1 539 NAC Transcription Factor Family AT5G04410 44.310 1.38e-152 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Glsi12g0766 NAM 4e-37 No_clan