Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0762 ATGGGTTTACCTATACTTATCCTTCTCTTCCTTTCCATCCCCTTCTCTTCCTCCAAGCTCACTCCTCATTATTACAAGAAAACATGCCCTGACTTTGAAAAAATCGTCAGAGAGAATGTCTTCACCAAGCAAAGCTCCATCCCATCCACCGCTGCCGGCGTCCTCCGCCTCTTTTTCCATGACTGCATAACCGACGGCTGCGACGCCTCGATCCTTGTGAGCTCCGCCAGTGGGACACAATCCGAACGTGATGCTGACATGAATCAATCCCTCTCAGGTGACGCCTTCGACATCATCAACAAAATAAAAAATGCCCTTGAGCTAGCATGCCCTGGCGTTGTCTCCTGCTCGGACATCATAGCACAGTCAACAAGAGACCTCGTAAAAATGGTGGGTGGGCCCTTTTATCAAGTACCTTTAGGTCGTAAGGACAGCCTGGTATCAAACGGGTCCAAGGTAGAAGAAAGCCTCCCCAAGTCAACCATGAGCATGGACGCCATTATTGAGAAGTTCACAAAAAAGGGTTTCACTATAAAAGAGATGGTAGCCCTAACTGGGGCCCACACAATCGGGTTCACCCATTGTAAGGAGTTCAGCAATAGGATCTTCCACTTCAGCAAAACCCAAGACGTGGACCCCACTATGCACCCCAAGCTAGCCGAAGGGTTGAAGAGGATTTGCCAAAATTACACCAAGGACCCTTCCATGTCAGCATTCAACGATGTAAGATCACCCAGCAAGTTTGACAATGCCTATTACAACAACGTTTTGAAGGGGTTGGGACTCTTGAGCTCAGATTCCCTTCTAGGGAGGGACCCAAGGACAAAGCCTTTGGTAGAGCTGTATGCTAAAAATCAAGAAGCTTTTTTCCAGGATTTTGCTAAGGCAATGGAGAAACTCAACGTTTTTGGAGTAAAAACAGGTAAAGAAGGAGAGGTAAGGCACAGGTGTGACCAATTCAACAATCTTCCCGAGCTATAG 981 0.474 MGLPILILLFLSIPFSSSKLTPHYYKKTCPDFEKIVRENVFTKQSSIPSTAAGVLRLFFHDCITDGCDASILVSSASGTQSERDADMNQSLSGDAFDIINKIKNALELACPGVVSCSDIIAQSTRDLVKMVGGPFYQVPLGRKDSLVSNGSKVEESLPKSTMSMDAIIEKFTKKGFTIKEMVALTGAHTIGFTHCKEFSNRIFHFSKTQDVDPTMHPKLAEGLKRICQNYTKDPSMSAFNDVRSPSKFDNAYYNNVLKGLGLLSSDSLLGRDPRTKPLVELYAKNQEAFFQDFAKAMEKLNVFGVKTGKEGEVRHRCDQFNNLPEL 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0762 326 Gene3D Peroxidase, domain 2 158 300 - -
Glsi12g0762 326 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 FunFam Peroxidase 158 300 - -
Glsi12g0762 326 Pfam Peroxidase 47 285 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 CDD secretory_peroxidase 19 320 IPR033905 GO:0004601|GO:0042744
Glsi12g0762 326 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 Gene3D - 23 321 - -
Glsi12g0762 326 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 PANTHER - 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi12g0762 326 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601
Glsi12g0762 326 FunFam Peroxidase 23 170 - -
Glsi12g0762 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0762 Glsi-ChrGlsi12 24586665 24587645 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0762 20 323 Peroxidase AT4G17690 59.868 2.55e-134 383