Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0704 ATGTTGGCTATGGAGAAGGATTTTGATTCCAAGTTGAAAATTCAGGAGAATTCGTCTAATGATGGGAATGTTCAGAGATCTAAAAGCTTTGCCTTCAGAGCCCCTCAGGAGAATTACACCATTCAGGACTTCGAATTGGGAAAGATCTATGGTGTTGGTTCATATTCTAAGGTTGTGAGGGCTAAGAAGAAGGACACGGGAGTTGTGTATGCATTGAAGATCATGGATAAAAAATTTATCACTAAAGAGAACAAAACAGCATATGTGAAGTTGGAACGCATAGTGCTCGATCAATTGGACCATCCTGGCATTGTTCGGCTATTTTTCACATTTCAAGACACATTTTCTGTGTCGGGACCCAGGGAAACTTTATTAACATATTGTACTGTTGGCTCTAACTTATATGAAGGGGGATCCTGGAAGCTTTTTATTTCCTGTGCACAGAAAGCTCGTCTGTCAGAGGATGAAGCACGTTTCTATGCAGCTGAAGTTGTGGACGCTCTTGAATACATACATAATATGGGATTGATACATCGTGACATTAAGCCAGAGAACTTGTTACTGACAGCTGAAGGACATATTAAGATAGCCGATTTTGGGAGTGTGAAGCCAATGCAGGACAGCCGAATTACAGTTCTTCCAAATGCAGCAGCATCAGATGATAAGGCCTGCACATTTGTGGGAACAGCTGCTTATGTTCCTCCAGAGGTTCTTAATTCTTCTCCAGCAACTTTTGGAAATGACCTTTGGGCTCTTGGATGCACATTATACCAAATGCTTTCTGGAACTTCTCCTTTTAAAGATGCTAGTGAATGGCTTATTTTCCAAAGAATTATTGCCAGAGATATTCGATTTCCAGATTACTTTTCTGAGGAAGCAAGAGACCTTATCGATCGGTTATTGGATTCAAACCCCATCAGGAGACCAGGAGCAGGACCTGATGGTTATGCTGTTTTGAAAATGCATCCATTTTTCAGGGGAGTAGACTGGAATAACTTAAGGGAACAAAGCCCTCCAAAACTTGCTCCAGAATCAGGGGCTCATTCTCCTGAGCATGATGTTCATGACGGAATCACTGGTGCTACATCATCTTCCGAAGGGATTGGTCACGTAACCAGGCTAGCTTCAATTGATTCCTTCGATTCAAAATGGCAACAGTTTTTGGAACCTGGGGAATCTGTTATTATGATCTCGATGGTGAAGAAATTACAGAAACTAACAAGCAAGAAGGTGCAGCTCATCCTTACCAACAAGCCAAAGTTGATCTATGTCGACCCTTCAAAACTAATTGTAAAGGGAAATATGATATGGTCTGATAATCCAAATGATCTTATTGTCCAAGTGACTAGTCCTTCACATTTTAAGATTTGCACACCAAAAAAGGTAATGTCATTTGAAGATGCAAAGCAAAGAGCGTGGCAGTGGAAAAAGGCAATTGAAGGGCTTCAAAACCGGTGA 1458 0.4115 MLAMEKDFDSKLKIQENSSNDGNVQRSKSFAFRAPQENYTIQDFELGKIYGVGSYSKVVRAKKKDTGVVYALKIMDKKFITKENKTAYVKLERIVLDQLDHPGIVRLFFTFQDTFSVSGPRETLLTYCTVGSNLYEGGSWKLFISCAQKARLSEDEARFYAAEVVDALEYIHNMGLIHRDIKPENLLLTAEGHIKIADFGSVKPMQDSRITVLPNAAASDDKACTFVGTAAYVPPEVLNSSPATFGNDLWALGCTLYQMLSGTSPFKDASEWLIFQRIIARDIRFPDYFSEEARDLIDRLLDSNPIRRPGAGPDGYAVLKMHPFFRGVDWNNLREQSPPKLAPESGAHSPEHDVHDGITGATSSSEGIGHVTRLASIDSFDSKWQQFLEPGESVIMISMVKKLQKLTSKKVQLILTNKPKLIYVDPSKLIVKGNMIWSDNPNDLIVQVTSPSHFKICTPKKVMSFEDAKQRAWQWKKAIEGLQNR 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0704 485 CDD STKc_PDK1 42 325 IPR039046 GO:0004674
Glsi12g0704 485 ProSiteProfiles Protein kinase domain profile. 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0704 485 Pfam Protein kinase domain 46 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0704 485 Gene3D - 361 485 IPR011993 -
Glsi12g0704 485 FunFam 3-phosphoinositide-dependent protein kinase 2-like 141 340 - -
Glsi12g0704 485 SUPERFAMILY PH domain-like 319 484 - -
Glsi12g0704 485 ProSitePatterns Serine/Threonine protein kinases active-site signature. 176 188 IPR008271 GO:0004672|GO:0006468
Glsi12g0704 485 Pfam PH domain 382 484 IPR033931 -
Glsi12g0704 485 FunFam 3-phosphoinositide-dependent protein kinase 2-like 42 131 - -
Glsi12g0704 485 MobiDBLite consensus disorder prediction 336 365 - -
Glsi12g0704 485 FunFam 3-phosphoinositide-dependent protein kinase 1 355 485 - -
Glsi12g0704 485 SUPERFAMILY Protein kinase-like (PK-like) 27 344 IPR011009 -
Glsi12g0704 485 SMART serkin_6 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0704 485 PANTHER SERINE/THREONINE-PROTEIN KINASE 27 351 - -
Glsi12g0704 485 Gene3D Phosphorylase Kinase; domain 1 1 131 - -
Glsi12g0704 485 Coils Coil 465 485 - -
Glsi12g0704 485 Gene3D Transferase(Phosphotransferase) domain 1 141 353 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0704 Glsi-ChrGlsi12 23656196 23665055 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0704 1 485 AGC Kinase Gene Family AT3G10540 77.800 0.0 768
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_PDK1 Glsi12g0704 Pkinase 4.4e-56 CL0016