Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0694 ATGGCCTCGCCGACGCCAAGTAATAATCGATCAACGTATCTAAGGGATGCCTCTGAGTACTCCAAGATGGAGGGCACCGGCACCTGGGATTCCCTGCAATGGACCAAGTTGGAGCCCAGTTCACGCTACGTTTCGCATGCCGATTTGGATTTCTTGCTCGAGGCAGAGCAAGTCATAGTCGAAGAACATGGTGTTGTTCTTGTTAATTCAGATGATGCGGGTACATTGATGTTAACGAATTTCCGTCTTCTTTTTCTGAGTGATAGAACTAGAAAAGTTATTGCCCTTGGAACAATTCCACTTGCAACGATCGAGAAGTTTAACAAGATAGCTGTAAAGATTCAGTCAGCTACTCGTCAATTAGACAAGACACCACCACAAAGATTGATCCAGGTTATCGGAAAAGATATGAGGATTATAGTTTTTGGTTTCAGGCCTCGTACAAAACAGAGACGTGCAATATTTGATGCATTACTAAGGAGTACAAAGCCTGCAAGACTATGGGATCTTTATGCTTTTGTATCTGGGCCTTCTAGGTTTAATAACTCTAACCCAAAGGTGCGCTTACTATATGAGTACTTTCGGCTTCTTGGAAAAGGCTCTTATCATGTCTCAATAAGTATGATTGAAAGTGGGTCCTTTACCTCATCGAATGACTTGTGGAGAATAAGTAGTGTAAACTCAAATTACAAAATGTGCCAGAGTTATCCGTTTGCTTTGATTTTACCAAAGTGCATCAGTGATGATGAAGTGCTCCAAGCTTCCAGCTTTCGTGGAAGATGTCGCCTGCCTATAGTTTCATGGTGCCATCCAGGTACTGGAGCAGTCCTTGCACGTTCATCCCAACCCTTAGTTGGTCTCATGATGAATATGAGAAGCAACACAGATGAAAAGCTTGTGGCTGCACTATGTGGCAAGCTTAGTGATGGCTCTCGGAGGAAGCTATATATTGCCGATGCAAGACCAAGGAAAAATGCATTAGCTAATGGGGCCATGGGAGGTGGTTCAGAATCGTCCTCCAATTATTTCCAATCTGAGATAGTATTTTTTGGCATAGACAACATCCATGCAATGAGAGACAGCTTTGCTCGGCTTAGAGAATACTTAGATACTCATGGGAGAACATCATCAGATGGAATGTCATCTTTTTTGAGACATGGTGGGTCGACATGGAGTGGAGGCAATCTCAGTAGTATGTCTGCTTCAGTATCAACCCTTGGGGACAGTGGATGGCTACTACACGTCCATAGTGTCTTAGCTGGTTCAGCTTGGATTGCTGCTCATGTTGCTATGGAAAAGGCTTCTGTGCTTGTACATTGCAGTGACGGATGGGATAGAACAAGTCAGTTGGTTTCACTTGCGAGCTTGTTGCTTGATCCATACTACCGTACATTCACAGGGTTTCAGGCACTTGTTGAAAAAGACTGGCTAGCATTTGGTCATCCATTTTCAGATCGACTGGGGCTGCCATCTGTCTCTGGTAGTGGCAACATGCCTTTTGAGTTAACTAGGCAGTCTTCTACTGGAAATTTCCCAGCATCACCCATGCGCCAGTCATCAGGAACATTCACATCTCAACAACCCACTTCTTCTCATGCACAGACTTCAAACAACTACTCTCCCATTTTTTTGCAGTGGGTTGATTGTGTTTCACAACTGCTGCGGATGTATCCTTTTGCTTTTGAGTTCTCCACGGCTTTCCTGGTGGACTTCGTAGATTGCGTTCTTTCTTGTCGATTTGGAAACTTCTTATGTAATAGTGAGATGGAGAGGCAGCAATGCAATATTTTTGAAGCTTGTGGATGTTTGTGGGCATACTTGGCTGACTTGCGTGCTTCAGAAGTACCTTCTCACGTGCATTATAATCTCTATTATGATCCATTGAAGCACAACGGTCCTATTTTGCCCCCAGCAGCAGCTTTAGCGCCAACTCTGTGGCCCCAATTCCATCTTCGTTGGGCTTGCCCAGAAGAAGCACAAGCTGGGGAAGTTGAAGCCAAAAGCAGGCAGATGGCTCTGAAATATTCTGAGATGAACAAGGCTAAAGAATTGGCAGAAAGGAAAGCTAAAGAAGTTGAAATTACGATGGAATCTTTGAGTGCAGAATTACAAAATGAGAAGCAGCTAAGCATCTCGGCTATGAACATTTACAAGAGGGCAAACAAAGAAAATGTGGCCATAAAGCGAGCAATTCAATCACTGGGGTGGAAGTTTCACTTCTCTGAAAGTGGTGATTGTGTTTTGGACATTGAAAGCAACTTGGTGGGGGCATCACAACACTCTATGTTTCCTTCTACCACAAAATATTCAGATAGTACCATGTATGATGACAAGAAGGATCTATCTGTTTCAGTAACAGTTACAGCAGATGATGACAATGATGATGCAAGTAATGCTGTTATTCGAGTTTGTGAAACTTTATGCTCAGGTTGTACTCAAGATGGAGGCTGCGGGTGGCCAAATGGTGGTTGTGCTCAACATGGTAGTCAGTTAGTTGGTCTAAAGGTAAATTTTGAAGCATTTGACCAATTGTCAATTGATGAAAATTATTTTTAG 2556 0.4323 MASPTPSNNRSTYLRDASEYSKMEGTGTWDSLQWTKLEPSSRYVSHADLDFLLEAEQVIVEEHGVVLVNSDDAGTLMLTNFRLLFLSDRTRKVIALGTIPLATIEKFNKIAVKIQSATRQLDKTPPQRLIQVIGKDMRIIVFGFRPRTKQRRAIFDALLRSTKPARLWDLYAFVSGPSRFNNSNPKVRLLYEYFRLLGKGSYHVSISMIESGSFTSSNDLWRISSVNSNYKMCQSYPFALILPKCISDDEVLQASSFRGRCRLPIVSWCHPGTGAVLARSSQPLVGLMMNMRSNTDEKLVAALCGKLSDGSRRKLYIADARPRKNALANGAMGGGSESSSNYFQSEIVFFGIDNIHAMRDSFARLREYLDTHGRTSSDGMSSFLRHGGSTWSGGNLSSMSASVSTLGDSGWLLHVHSVLAGSAWIAAHVAMEKASVLVHCSDGWDRTSQLVSLASLLLDPYYRTFTGFQALVEKDWLAFGHPFSDRLGLPSVSGSGNMPFELTRQSSTGNFPASPMRQSSGTFTSQQPTSSHAQTSNNYSPIFLQWVDCVSQLLRMYPFAFEFSTAFLVDFVDCVLSCRFGNFLCNSEMERQQCNIFEACGCLWAYLADLRASEVPSHVHYNLYYDPLKHNGPILPPAAALAPTLWPQFHLRWACPEEAQAGEVEAKSRQMALKYSEMNKAKELAERKAKEVEITMESLSAELQNEKQLSISAMNIYKRANKENVAIKRAIQSLGWKFHFSESGDCVLDIESNLVGASQHSMFPSTTKYSDSTMYDDKKDLSVSVTVTADDDNDDASNAVIRVCETLCSGCTQDGGCGWPNGGCAQHGSQLVGLKVNFEAFDQLSIDENYF 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0694 851 Coils Coil 675 709 - -
Glsi12g0694 851 MobiDBLite consensus disorder prediction 507 535 - -
Glsi12g0694 851 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 215 654 IPR029021 -
Glsi12g0694 851 Gene3D - 60 162 IPR011993 -
Glsi12g0694 851 SUPERFAMILY PH domain-like 52 174 - -
Glsi12g0694 851 CDD PTP-MTM-like 261 552 - -
Glsi12g0694 851 ProSitePatterns Tyrosine specific protein phosphatases active site. 438 448 IPR016130 GO:0016311|GO:0016791
Glsi12g0694 851 Pfam Myotubularin-like phosphatase domain 189 592 IPR010569 -
Glsi12g0694 851 ProSiteProfiles Myotubularin phosphatase domain. 198 650 IPR010569 -
Glsi12g0694 851 SMART gram2001c 45 111 IPR004182 -
Glsi12g0694 851 PANTHER MYOTUBULARIN-RELATED 23 782 IPR030564 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0694 1 851 Protein tyrosine phosphatase (PTP) family AT3G10550 66.316 0.0 1133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi12g0694 12 23521958 23554395 Glsi12g0694 12 23521958 23554395 ECH