Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0693 ATGGGATCTGTCATTCATAGCACAGTGGACGTTTCTGCGAGTGACAAGGAAAATGGATATGCCAACCCCTCTAATCCACAGGAACTAGATGCAGGAGCTCTATTTGTTCTTAAATCTCGAGGGTCATGGTTGCATAGTGGGTATCATCTGACGACATCGATCGTGGCTCCAGTGCTTCTGACTCTTCCATTCTCGTTCACCCTGCTAGGATGGGCTGGAGGAGTGCTTTGCTTGACTCTAGCCGGTCTCGTCACTTTCTATTCTTACAACCTTCTATCTGCGGTCTTGGAGCACCATGCTCAGCTTGGGCGTCGCCAGCTTCGCTACAGGGACATAGCCAGGGATGTTCTAGGACCACGATGGGCCAGATATTATGTAGGCCCACTTCAATTCGCCATATGCATTGGTTCAGTTATTGGTGGGCCTCTTGTGGGAGGACTAAGCCTCAGATTCATTTACATGCTCTACAACCCAAATGGACCAATGAAGCTATACCAATTCATCATCATATGTGGGATCGTCACGATGGGTTTGGCTCAATTTCCATCCTTCCACTCATTGAGGCACATGAATCTTGTTTCTCTCGTTCTTTGTTTGGCTTATAGCACATGCGTCACAATTGGCTCCATTTACATTGGTCACTCAAATAATGCCCCCACTAGAAATTATTCAATAAAGAGTAGTGGTATAGACAAAGTCTTTGGTGTCTTCAATGGCATTTCTATCATTTCTACCACTTTTGCTTGTGGAATCATTCCTGAAATCCAGGCAACAATAGCACCTCCAGTGAAGGGCCAAATGTTCAAAGGGCTTTGTGTATGTTATTCTGTGATAGCTTCATGCTATTACAGTGTTGCCATATCAGGTTATTGGGCATTTGGGAATCAAACCAGTGGAACAGTTATTGCTAACTTTATGGGAGAAGGGAATCCTTTGCTGCCCACTTGGTTTCTTCTTATGATCAATATATTCACTCTTCTGCAAGTACTAGCGGTGACCGTGGTATACATGCAGCCAACAAACGAAGTATTCGAATCATTTTTCGCAGACCCAACGAAGGGAGAGTTTTCCCTTCGGAATGTGGTGCCAAGGTTGATTTCTAGGTCACTGGCGGTGGTCTTAGCCACAGTTTTTGCTGCAATGCTGCCATTCTTTGCGGACATAACCGCCTTGTTTGGGGCATTTGGGTGCATTCCTCTCGACTTCATTTTGCCCATGGTTTTCTTCAATCTCACTTTCAAGCCCTCAAAGTATAGTATGATCTTCTGGGTGAACACTTTGATAGCTTTAGCATCCTCAGTTTTGTTTGTAATAGGAGCTATAGCTTCAGTAAGACAGATAGTTCTTGATGCCAAAACATATCGTTTATTTTCTGACACCCTCCTGTGTTTTCTGTTCTCTCACTCAGTTATGGCTACTGAGGACTTTCAGCTCCTCGACTCCCCCTCCCACCACCCCCACTCGCAGCCTCACCTCCACGCTCACACGCGCCACTTCCCTTCTTCTTCCTCCTCTAGCCTCAGCGGAGTCCCCACCTCCGCCGATGCCGGGGACTCCGCCAATGCCGACTACTACACTCAATCCTTTCACGATGAGGGCGACGATTCCTCCGAGCTGAACAAATCCGCGTCTGGAATCCCGACCCCTAATTCGAAGCGAACTGCCGTTGCCACCGCTGATAGCGCTTATTACTATAACAAGAAGTTGAAATCATCCGCCGCCGGTGCCGGAGGCAGCGCCACGAGCGCCGATCCTGACTCAGGAACCGAGACGACATACCGGATCGATTATCGTAAGGACCGGGAGGAATGGAGTGACACGGCCATTGCTTGTCTCCTGGACGCGTATACGGAGAGATTCATCCAGCTGAACCGCGGGAATCTGCGGGGTCGCGATTGGGTGGAGGTGGCGGAAGCCGTAGGTGGCGGCATTGATGGAAATCACAAATCGTGTAAGAGTGTGGAGCAGTGCAAGAATAAGATTGATAATTTAAAGAAGAGGTATAAGCTCGAGCTTCAGAGAATGAGTAATGGCGGGGTAACCCCAGGTAACTGGCTTTGGTTCAAAAAGGTTGAAGCTATTGTTGGGAATTCATTGAGTGTGAAGACGATTTCCGATGATGAGAAGGGTGGTGGAGCTAATCCCTTGCCTATGGCTAGACGCCCTAAGACTAGATATACGACTACCAATGTTGCAATGGTGAGCAGCCTGAAATCGAAGCCGGCATCAAATTTCAAATGGAATAGAGTTGTGTTTAAAATCAGTGGTTCTGCATTAGGTGGAAACTGCCAAAGTATTGACCCCAAGGTGGCTATGCAGATTGCTAGGGAAGTGGCAACAGCTTGCCGCCTTGGGGTGGAGGTGGCCATTGTTGTTGGTGGTCGTAACTTGTTTTGTGGAGATTCATGGGTGTCTGCTACTGGGTTGGATAGACCTATGGCTTACCAGATTGGTATGATGGCAACAGTAATGAATTCTATTCTGCTTCATTCTGCTTTGGAGAAGCTGGGTGTTCAGGCACGTGTTCAGAGCAAATTCTCTGTGCCAGAGGTTGCTGAACCTTATAACAGGCAACGAGCTATCCGACATCTTGAGAAAGGAAGGGTTGTCATATTTGGTGGTGTCGGTGCTGGCACTGGAAATCCACTCTTTACCACTGATGCAGCTGCAGCTCTGAAAGCTTCTGAGCTTAATGCAGATGCTGTTCTGAAAGGTACCAATGTTAATGGTGTCTATGACTGCCATTCTGGTAGTGACAATGTAACACTAGATCACATTTCCTTTGGGGAAGTTACTTCTAGGGGCATAACATCCGTGGACATGATGGCACTAGCATACTGTGAAGAGAACAGAATTCCTGTTGTAGTCTTCAACTTGCTTCAACCTGGGAATGTTTCAAGAGCTCTATGCGGAGATCAAGTTGGCACATTGATTGATCAAACAGGAAGTATTAGTTAA 2958 0.4716 MGSVIHSTVDVSASDKENGYANPSNPQELDAGALFVLKSRGSWLHSGYHLTTSIVAPVLLTLPFSFTLLGWAGGVLCLTLAGLVTFYSYNLLSAVLEHHAQLGRRQLRYRDIARDVLGPRWARYYVGPLQFAICIGSVIGGPLVGGLSLRFIYMLYNPNGPMKLYQFIIICGIVTMGLAQFPSFHSLRHMNLVSLVLCLAYSTCVTIGSIYIGHSNNAPTRNYSIKSSGIDKVFGVFNGISIISTTFACGIIPEIQATIAPPVKGQMFKGLCVCYSVIASCYYSVAISGYWAFGNQTSGTVIANFMGEGNPLLPTWFLLMINIFTLLQVLAVTVVYMQPTNEVFESFFADPTKGEFSLRNVVPRLISRSLAVVLATVFAAMLPFFADITALFGAFGCIPLDFILPMVFFNLTFKPSKYSMIFWVNTLIALASSVLFVIGAIASVRQIVLDAKTYRLFSDTLLCFLFSHSVMATEDFQLLDSPSHHPHSQPHLHAHTRHFPSSSSSSLSGVPTSADAGDSANADYYTQSFHDEGDDSSELNKSASGIPTPNSKRTAVATADSAYYYNKKLKSSAAGAGGSATSADPDSGTETTYRIDYRKDREEWSDTAIACLLDAYTERFIQLNRGNLRGRDWVEVAEAVGGGIDGNHKSCKSVEQCKNKIDNLKKRYKLELQRMSNGGVTPGNWLWFKKVEAIVGNSLSVKTISDDEKGGGANPLPMARRPKTRYTTTNVAMVSSLKSKPASNFKWNRVVFKISGSALGGNCQSIDPKVAMQIAREVATACRLGVEVAIVVGGRNLFCGDSWVSATGLDRPMAYQIGMMATVMNSILLHSALEKLGVQARVQSKFSVPEVAEPYNRQRAIRHLEKGRVVIFGGVGAGTGNPLFTTDAAAALKASELNADAVLKGTNVNGVYDCHSGSDNVTLDHISFGEVTSRGITSVDMMALAYCEENRIPVVVFNLLQPGNVSRALCGDQVGTLIDQTGSIS 985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0693 985 CDD AAK_UMPK-PyrH-Ec 749 979 IPR015963 GO:0005737|GO:0006221|GO:0033862
Glsi12g0693 985 Pfam Amino acid kinase family 748 958 IPR001048 -
Glsi12g0693 985 MobiDBLite consensus disorder prediction 481 552 - -
Glsi12g0693 985 PANTHER URIDYLATE KINASE 597 984 - -
Glsi12g0693 985 Pfam Transmembrane amino acid transporter protein 40 444 IPR013057 -
Glsi12g0693 985 SUPERFAMILY Carbamate kinase-like 745 978 IPR036393 -
Glsi12g0693 985 FunFam Aspartate/glutamate/uridylate kinase family protein 604 670 - -
Glsi12g0693 985 FunFam Uridylate kinase isoform A 739 984 - -
Glsi12g0693 985 MobiDBLite consensus disorder prediction 495 526 - -
Glsi12g0693 985 Coils Coil 654 674 - -
Glsi12g0693 985 Gene3D - 604 670 - -
Glsi12g0693 985 Pfam Myb/SANT-like DNA-binding domain 601 693 IPR044822 -
Glsi12g0693 985 Hamap Uridylate kinase [pyrH]. 745 979 IPR015963 GO:0005737|GO:0006221|GO:0033862
Glsi12g0693 985 Gene3D - 738 984 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0693 Glsi-ChrGlsi12 23507506 23519731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0693 23 459 Organic Solute Cotransporters AT5G41800 50.000 3.06e-138 420
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi12g0693 Aa_trans 2.4e-59 CL0062