Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0692 ATGGCAAAGGGGGACGACGCTATGAGAAAGAAGAAGAGTAAAGCGACTCGGAGGAAGCTTAGGAAGCAGAATGACTCTTCCTCAGTCTCTGCAAAGGTCGCCGCCATCATCGCCGCCAAGAAGCGCCGCCTTACCGGAAAGCGCCGCATGTGTCAGGGGATGTGCTTTAGCCTGCCTACTCCAGATGATCCATTCAATGATCAACATGGGAAAGAGGAATTAAAAAAAAAGGGAACTAAAAAGAAAACACATTCCCAGAAAGATGAGAGAGTTTCTGTTGACGGGAAGAGTGCTGCTAGAAGAAAAGACAGCCTTGGTGAGAATACCTCAAAATTTAAAGAGGTCACAGATTTGAAGAATGAACAGAAAAAATCTGTCACAGTCACCAATAATCTGGGTCAGGAATGTAATATTAACTCAAAAAGAGCAAACATTGAGGTGCTTAAGCTTAAGAAGGGCAACCTTTGTGTTCCCCAGGGTCAAGGTTGTGAAAACTCTGAGTCACCTTCAAAATTTCTTATATGGTGTTTAAATTCAATTGAAAATGCACTGTGGCATGGTGATGCTTACACCGATGGAGAGGGAAACTCTCTGTTTTTCAACTCATGGGGAGTAGAATTTTGGAAATGCTATTCTCACGGGAAAGATATGGTGGAAACCAGTGGAAATTCTGCAACCACTGAACAAATTGCATGGATGGTTTCTAGTGCTGCTGATACTATTGCAAGAAAGGAGAAAGAAGGCTTATCCTTTGCGAGTCCCTTTCTCCTATTCCTCGTACCTTCCCAAGAAAAAGCTGGCAAGGTCCGTGCAGTTTGCAAGGCTTTGAAGTCTCTTGGAATTCATACAGTGAGTATACACCCAGGTGCTTCCTTAGATCATCAGATTCAAGGTCTAAAGAGTTGTGAGCCTGAGTTCCTGGTTTCCACTCCTGAAAGGCTTTTGGAGCTCGTTTCCTTGAAGGCTATTGATGTATCGAGTGTCTCTATGCTGGTTGTTGATGGGCTGAACTCTATTTGTAGTGCTGGCCACACTGATGCTATTAAGTCAATCAAGAAGTCTATTTCTGGTGCTCCCCGACTTGTGGTTTTCAATGATTGCACCAGCCATATGTCTATCCCAATAGTTCAGTATCTTTTGGCTGGATCAATTTGCAGACTATCTTTTAATGATTCAATTACAAGTCAAAGTTCATGTATTATCCAGTCTGTGAAAGTGTGTGCATCTGAAGAAGAAAAACTTGAAAAGTGCATCGAAGCCCTGGATCAATCTGGGAGTGGCCAGACTTGTAAGTTAGAGGTGCTATATATTTTAAGGAAAGGTTTTAAGTGTCAAAAGTTGGTCGCTACACTCAAATCCAAGGACTATTCCATTTCAGCTGGCTCTAATGCTCCAATTTTTAATGACAGTGTGGGTTCAGACATCAGAATGAGACGGGCAGTTTCCACCATTGATTTGGAGCATATCTTTACTGCAGATTTAGGGAAGCATGATGTAATAGTTCTACCCAGTTTTGTACCCTCTATTGACAGTTATGTGCATATTTTAACGAGGATGGCCCGCTACAGTGTCAATGGTGTATTGCACAGTTTCTTAACTAAAGAAGATACAAAACTTGCCGGATCATTGATTGAAATTCTAGAACAATGTGGGCAGGCAGTGCCGGAAGCCTTGCGACACTTGCATCTTACATCAAACATGATGGAAGAGTGA 1713 0.4244 MAKGDDAMRKKKSKATRRKLRKQNDSSSVSAKVAAIIAAKKRRLTGKRRMCQGMCFSLPTPDDPFNDQHGKEELKKKGTKKKTHSQKDERVSVDGKSAARRKDSLGENTSKFKEVTDLKNEQKKSVTVTNNLGQECNINSKRANIEVLKLKKGNLCVPQGQGCENSESPSKFLIWCLNSIENALWHGDAYTDGEGNSLFFNSWGVEFWKCYSHGKDMVETSGNSATTEQIAWMVSSAADTIARKEKEGLSFASPFLLFLVPSQEKAGKVRAVCKALKSLGIHTVSIHPGASLDHQIQGLKSCEPEFLVSTPERLLELVSLKAIDVSSVSMLVVDGLNSICSAGHTDAIKSIKKSISGAPRLVVFNDCTSHMSIPIVQYLLAGSICRLSFNDSITSQSSCIIQSVKVCASEEEKLEKCIEALDQSGSGQTCKLEVLYILRKGFKCQKLVATLKSKDYSISAGSNAPIFNDSVGSDIRMRRAVSTIDLEHIFTADLGKHDVIVLPSFVPSIDSYVHILTRMARYSVNGVLHSFLTKEDTKLAGSLIEILEQCGQAVPEALRHLHLTSNMMEE 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0692 570 Gene3D - 484 564 IPR027417 -
Glsi12g0692 570 MobiDBLite consensus disorder prediction 1 32 - -
Glsi12g0692 570 MobiDBLite consensus disorder prediction 56 109 - -
Glsi12g0692 570 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 250 361 IPR027417 -
Glsi12g0692 570 MobiDBLite consensus disorder prediction 84 109 - -
Glsi12g0692 570 Gene3D - 245 383 IPR027417 -
Glsi12g0692 570 Pfam DEAD/DEAH box helicase 246 355 IPR011545 GO:0003676|GO:0005524
Glsi12g0692 570 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 50 14 542 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0692 257 543 Eukaryotic Initiation Factors Gene Family AT1G72730 23.569 1.35e-09 58.5