Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0681 ATGGGTGACCAGTATGGTCTGCCGGATCTCCGGCCGTTGATGTCAGGAAGAAACCATGAACTCGCAAACCCAGAACTCCCAGAGCCACTACTATCTGTCCAGCAAGGTGCTATACTACTACCACCCAATAGCTACGACCCCACCATGGCTGAAGATGTTTTCTCTCGTAGGGTCTCTCAGTTTGTAGCTTCTGGTACCGTGTTCAATCCCACAACAAACACTCTCCCTATTACTCTCGCTAATTCTGCAGATCATCATGCTACTGCTACTACTGCATTTTCTGCAGAAAAGGAATGGCCTACTGGATTTGAGAGTGGAAACAACAGGTGGCCTAGACAAGAAACTCTTTCTCTTCTAGACGTCAGATCTCGTCTTGATTCCAAGTTCAGAGACACTAATCACAAAGGACCTTTGTGGAATGAAGTTTCCAGGATAATGGAGGAGGAATATGGGTACCAAAGAAGTGGAAAGAAGTGCAAAGAGAAGTTTGAGAATTTGTACAAGTATTACAAGAAGACCAAAGATTGCAAATCTAGTAAACAAGATGGAAAGCACTATAGATTCTTCCGCCAGCTCGAAGCTATATGTGGGCAAAGAACTATTCATGCCTCTACTTCAGAAACCATCCACCATGCCATAAACACTAACATTGCTCCTTATAATCAAACTCCAACCTTCCAAACTATTAATAACCAGCAAGACATTCTTCATTCTCCTAATTTCTCAAACTCATTAGAATTCATGACATCCTCGTCCGAAAACAATGGCGAGGAGAATGATCTTTCAAACATGGCAAGGGAGAAGAAGGGAAAGAGAAGCTGGAGAGCTGTGGTTGAGGAGCTTGTGGACTCTCACATGAGGAAGGTTATGGAGGCTCAAGATACTTGGATGAAGAAGATCTTGAGTGCTATTGAACAAAGGGAAGTAATGGCGTTTAAGGAAGAAGAAAGAAAGAGAGAAGAGTCAATGAGCGATGAGGAGAAAGATCTTTTAGACATGGCAAGGGAAAAGAAGGGAAAGAGAAGCTGGAGAGCTGGGGTTAAGGAGCTTGTGGACTCTCACATGAGGAAGGTTAAGGAGGCTCAAGATGCTTGGATGGAGAAGATCTTAAGTGTTGTTAAACAAAGAAATAATGGCATCTAA 1143 0.4313 MGDQYGLPDLRPLMSGRNHELANPELPEPLLSVQQGAILLPPNSYDPTMAEDVFSRRVSQFVASGTVFNPTTNTLPITLANSADHHATATTAFSAEKEWPTGFESGNNRWPRQETLSLLDVRSRLDSKFRDTNHKGPLWNEVSRIMEEEYGYQRSGKKCKEKFENLYKYYKKTKDCKSSKQDGKHYRFFRQLEAICGQRTIHASTSETIHHAINTNIAPYNQTPTFQTINNQQDILHSPNFSNSLEFMTSSSENNGEENDLSNMAREKKGKRSWRAVVEELVDSHMRKVMEAQDTWMKKILSAIEQREVMAFKEEERKREESMSDEEKDLLDMAREKKGKRSWRAGVKELVDSHMRKVKEAQDAWMEKILSVVKQRNNGI 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0681 380 PANTHER FI21293P1 90 329 - -
Glsi12g0681 380 CDD GT1 108 174 - -
Glsi12g0681 380 Gene3D - 110 172 - -
Glsi12g0681 380 MobiDBLite consensus disorder prediction 1 22 - -
Glsi12g0681 380 ProSiteProfiles Myb-like domain profile. 108 167 IPR001005 -
Glsi12g0681 380 Pfam Myb/SANT-like DNA-binding domain 108 195 IPR044822 -
Glsi12g0681 380 MobiDBLite consensus disorder prediction 314 339 - -
Glsi12g0681 380 FunFam trihelix transcription factor PTL-like 110 172 - -
Glsi12g0681 380 MobiDBLite consensus disorder prediction 249 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0681 Glsi-ChrGlsi12 23218856 23226161 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0681 337 376 Trihelix Transcription Factor Family AT5G03680 40.000 4.57e-06 46.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi12g0681 Myb_DNA-bind_4 1.8e-18 CL0123