Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Glsi12g0678 | ATGCTGCCTTCCATTTTTATACCCTCTATATGTCCTTCACTTTACTTAATCAACTCTTCTTTATCATTCTCTCTCTTTTCTTCTTCCTCTTCCAAAATGGCTTTTCTTAATTTAACCTATGCTTCTCTTTCATCTTCCTACCACCTCATCTTCACCCTACTAGCTTTCCTCATTTCAGGCCTTATTTTCTTGTTCACCCATAAAACCAAATCCAGAAAGCTCAACCTTCCTCCAGGACCACCTGGGTGGCCTATTGTTGGGAACCTTTTCCAAGTTGCGCGCTCTGGGAAGCCTTTCTTCGAATATGTGAATGACCTTAGACCAAAATATGGGTCAATATTCACCCTCAAGATGGGGACAAGGACAATGATCATTCTCAGTGATGCAAAGTTGATTCATGAAGCTCTGATTGAGAAGGGTCAAGTCTATGCTACAAGGCCTCGTGAGAATCCAACGAGGAACATCTTCAGTGCCAACAAGTTCAGTGTGAATGCAGCAGTTTATGGCCCTGTTTGGAGGTCACTGAGAAGAAACATGGTGCAGAACATGCTTAGCTCAAGCAGGGTCAAGGAGTTTCGAAGTGTGAGAGATAACGCTATGGACAAATTTATCAATAGGCTGAAAGCTGAAGCTGAGGTGAATAATGGGGTTGTTTGGGTGCTCAAAAACGCAAGGTTTGCTGTATTTTGCATACTTTTGGCTATGTGCTTTGGGCTAGAGATGGATGAAGAAACAGTGGAGAAAATGGACCAGATGATGAAATCTGTTCTCATCACCTTGGATCCCAGAATCGATGACTATCTCCCAGTTCTGAGCCCCTTTTTCTCGAAGCAGAGGAAGAAGGCTTTGGAAGTTCGTAAACAGCAGATAGAGTTCATAGTCCCTTTCATCGAGCAGAGAAGAAGAGCAATTCAAAACCCAGGATCGGATCATACAGCTACAACGTTTTCCTACCTCGACACCCTATTCGATCTCAAAGTAGAAGGGAGAAAATCAGGACCCACAAGCGCAGAATTGGTGACCCTCTGCTCAGAGTTCCTCAATGGCGGCACAGACACAACTGCAACCGCAATTGAATGGGGCATGGCCCAGCTCATAGCAAACCCAGGAGTTCAACACAAACTGTTCGATGAAATTACTCAGACAGTGGGAGACAAGAAAGTGGACGAAAAGGACGTTGAGAAAATGCCATACCTGCGAGCTGTGGTAAAGGAACTGCTACGGAAGCATCCTCCAACCTACTTCTCCCTCACCCATGCGGTGACAGAGCCAACGACATTGGCAGGGTACGACATACCCACTGATGCGAATGTTGAGATCTACCTGCCAACCATTGGAGAGGACCCTAAATTGTGGTCCAACCCGGAAAAATTCGACCCGGACCGGTTCATCTCCGGCGGGGAAGATGCGGATATAACCGGGGTCAAGGGAGTGAAGATGATGCCATTTGGGGTGGGGAGGAGGATATGCCCTGGTTTGGGTATGGCCACAGTGCATGCCCATCTGATGCTGGCTAGAATGGTGCAGGAATTTGAGTGGGAAGCATACCCACCCGAGAAGAAGTTGGATTTCACTGGGAAGTTGGAGTTCACTGTGGTGATGAAGGAAACTCTACGAGCTAAGATCAAGCGCAGAGCTGAGAAAATGGAGCTGTAA | 1656 | 0.4656 | MLPSIFIPSICPSLYLINSSLSFSLFSSSSSKMAFLNLTYASLSSSYHLIFTLLAFLISGLIFLFTHKTKSRKLNLPPGPPGWPIVGNLFQVARSGKPFFEYVNDLRPKYGSIFTLKMGTRTMIILSDAKLIHEALIEKGQVYATRPRENPTRNIFSANKFSVNAAVYGPVWRSLRRNMVQNMLSSSRVKEFRSVRDNAMDKFINRLKAEAEVNNGVVWVLKNARFAVFCILLAMCFGLEMDEETVEKMDQMMKSVLITLDPRIDDYLPVLSPFFSKQRKKALEVRKQQIEFIVPFIEQRRRAIQNPGSDHTATTFSYLDTLFDLKVEGRKSGPTSAELVTLCSEFLNGGTDTTATAIEWGMAQLIANPGVQHKLFDEITQTVGDKKVDEKDVEKMPYLRAVVKELLRKHPPTYFSLTHAVTEPTTLAGYDIPTDANVEIYLPTIGEDPKLWSNPEKFDPDRFISGGEDADITGVKGVKMMPFGVGRRICPGLGMATVHAHLMLARMVQEFEWEAYPPEKKLDFTGKLEFTVVMKETLRAKIKRRAEKMEL | 551 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 441 | 465 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 227 | 245 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 400 | 418 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 131 | 152 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 358 | 384 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 107 | 126 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 490 | 513 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 480 | 490 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | E-class P450 group I signature | 338 | 355 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | Pfam | Cytochrome P450 | 77 | 534 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | Gene3D | Cytochrome P450 | 68 | 551 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 483 | 492 | IPR017972 | GO:0005506|GO:0016705 | |
| Glsi12g0678 | 551 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 55 | 534 | - | - | |
| Glsi12g0678 | 551 | SUPERFAMILY | Cytochrome P450 | 77 | 545 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | CDD | CYP77_89 | 109 | 539 | - | - | |
| Glsi12g0678 | 551 | PRINTS | P450 superfamily signature | 349 | 366 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | P450 superfamily signature | 401 | 412 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | P450 superfamily signature | 490 | 501 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | PRINTS | P450 superfamily signature | 481 | 490 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Glsi12g0678 | 551 | FunFam | Cytochrome P450 family protein | 70 | 547 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Glsi12g0678 | Glsi-ChrGlsi12 | 23141210 | 23142865 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Glsi12g0678 | 43 | 546 | Cytochrome P450 | AT5G04630 | 65.613 | 0.0 | 731 |