Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0661 ATGGGTGGAGATGGTGGAGGTGGGGTTGTGAGGGCAGTGGGAAGCAGCTTGAGGATGAGCGTAGGGTCAAGAGGAATTGAGGGGGAGTCATGGAGGTGTGATGAAGGTGTGTTTGATCATCTGAGAGGTATGAGGAGGGAAGATGAGGAAGAAGAGCTGAAGTCGGTTGCCATAGAGAGGCTTCCAACCTTTGAGAGGATCAGCAAAGGGATGATGAAGCAGGATTTCCATTACTGGTTGTTCTGGGTTGGACTAGAAATTCCCAAGATTGAAGTTCGATTTGAGCATTTGTTCGTAGAAGGGGATGCATATACTGGAACCAGAGCACAGCCAACACTGGTGAATTCTACCATAAATGCGATAGAGGGAGTTATTGGATCAATCAAGCTTTTCCCATCTAAGAAAAGGGTTGTTAAGATACTCCAAGATGTCAATGGAATTCTGAAACCATCAAGATCAAGTTATAGATCAAGTTCACCTGAGAATTCTTCTTTAGAGCCAGTGTTTTCTAGTTTTACTTCTGCATTAATCAAAGATAATGAACAGGTATCAGGAAGAATCACTTACTGTGGTCAGGAACTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTATATCAGCCAGCATGATCTTCACCACGGAGAGATGACAGTCAGAGAGACTCTGGACTTTTCTGGGCGCTGCTTGGGCGTTGGAACAAGGTATGATCAACTGCTAGAACTGTTAAAACGAGAAAAGCAAGAAGGAATCAAACCAGACCCTGAGATTGATGCTTTCATGAAAGCCACAGCAATGGCTGGTCAAGAAACAAGTCTTGTCACAGACTATATTCTCAAGATACTTGGATTGGAAGCATGTGCTGACACTTTGGTGGGAGATCAGATGAGAAGGGGCATATCTGGTGGAGAAAAGAAGCGATTAACAACCGGTACGAGAATGCACCATTGGCTTCTTCTTCAATCACATAGGTTTTTTCGTCAGTTATTGGCGTTCTTCTGTGTGCATCAAATGAGTTTATCTCTTTTTCGCTTCGTTGCTGCAATTGGAAGAACAGAAATTGTGGCGAACACAATTGGTACCTTCACCCTTCTAATTGTTTTTGTACTTGGTGGGTTCATTGTTGCCAAAGATGACATTAAACCATGGATGATATGGGGCTATTATGCTTCTCCTATGATGTACGGACAGAATGCCATAGTCATCAATGAATTCCTTGACAAAAGATGGAGTGCTCCCAATATTGACCCGAGAATCCCTGAGCCTACGGTTGGGAAGGCTCTTCTGAAGACCAGAGGCATGTTCACTGAAGATTATTGGTACTGGATTTCTGTTGGTGCTCTGCTAGGGTTTTCTCTGCTTTTCAACATTTGTTTCATTGCTGCATTAACATTTTTGAGCCCATTTAGAGATTCTAAATCTATTATCGTGGAGGAGGATGACAAAATGACAAACATGAACAAATCATCCCCTACCAAAGAACAGGATATGAGAACCACAGAACATGGTTCAGCTTCAGCTACTAACTTGTTTCAAGGAATTGAAATGGTTGCAAGTAACACCATCGAAGACAGTTCAATTCCTAAAACAGCAGAGAGTGCAACAACTAAGAGGGGAATGGTCTTGCCTTTTCAGCCCCTATCACTTGCTTTTGATCACGTGAATTACTACATTGATATGCCAACTGAAATGAAGAACCAAGGACTTGAAGAGAGTAGGCTGCAACTTCTTAGAGATGTCAGTGGTGCTTTTAGGCCTGGAGTTTTAACAGCGTTAGTTGGTGTAAGTGGTGCTGGAAAGACCACTTTGATGGATGTTCTTGCGGGGAGAAAAACTGGTGGTTATACTGAAGGAAGCATTAGAATTTCTGGTTTCCCAAAGAACCAAGCAACTTTTGCTCGGATTACTGGTTATTGTGAACAAAATGATATCCATTCTCCAAATGTCACAGTCTATGAATCTCTCGTGTTTTCTGCTTGGCTGCGCCTCGGTAAGGAGGTGAAGAGAGAAACAAAGAAGATGTTTGTAGATGAAGTTATGGAGCTGGTGGAGCTACATCCAGTCAAAGATTTTTTAGTAGGACTTCCAGGAAGAGATGGTTTATCAACTGAACAAAGAAAGAGACTCACCATTGCTGTAGAATTGGTTGCCAACCCTTCTATAATCTTCATGGATGAGCCAACATCCGGCCTTGATGCTAGAGCTGCAGCCATTGTTATGCGTACTGTTAGAAATACTGTTGATACTGGGAGAACTGTTGTCTGCACAATTCATCAACCTAGCATTGACATTTTTGAATCTTTTGATGAGCTGCTTTTGATGAAGAGAGGAGGACAAGTCATATATAGTGGTCCCCTTGGCCAACATTCTCTCAGGTTGATAGAGTACTTTGAAGCTATTCCAGCCGTTCCTAAGATCAAAGATGGTATTAACCCAGCCACATGGATGTTGGAGATCAGTTCTCCAGCAGTTGAGTCTCAGCTAGGTGTAGACTTTGCAGAACTATACACCAAATCAGAACTATATCAGAGGAATCAGGAACTTATTAAAGAACTAAGCACACCAGCACCAGGAGCAAAGAACCTTTACTTCCCAACTAAATACTCCCGGTCCTTCATTACTCAATGGAAAGCTTGCTTCTGGAAACAGCACTTATCCTACTGGAGGAACCCACCCTATAATTCCATCCGGTTCTTCTTGGCAATAGCTGTTGGTGTCATTTTTGGGCTCATTTTCTGGAATGAAGGAGATCAAATACAAAAGGAACAAGACCTGTTCAATCTCATAGGAGCTATGTACTCTGCTATTTTCTTCCTTGGATGCACAAACACTTCCTCTGTCCAACCTGTTGTTGCAATAGAAAGGACGGTCTTCTACCGGGAAAGAGCAGCCGGAATGTACTCAGCTCTTCCTTATGCATTTGCTCAGGTAGCAGTAGAGTTGATTTATGTAGCAATCCAAACTCTTCTCTATAGCCTCATCCTTTTCTCAATGATTGGCTTCACCTGGCGAGCTGATAAGTTCTTCTGGTTCTACTACTTCGTCTTCATGTCCTTTGTCTACTTCACACTCTATGGGATGATGACTGTGGCTCTTACACCAAATTACCAAATTGCTGCAATTGTTATGTCCTTTTTTCTCTCTTTCTGGAACCTGTTCTCTGGTTTCCTTATCCCAAGAAAGCAAATTCCAATATGGTGGAGGTGGTATTACTGGGCATGCCCAACAGCTTGGACTGTATATGGCCTTGTGACTTCCCAAGTGGGTGACAAAAACAATCTTGTGGAGGTTCCTGGCTCAACACAAATATCAGTAAAAGATTACCTTGAGAAGCATATGGGCTTTGAATATGGTTTCCTTCCAGTTGTTGCTGTTGCTCATATTGCTTTTGCTATCCTCTTCCTCTTTGTATTTGCATATGGCATCAAGTTTATTAATTTCCAGAGAAGATAA 3450 0.4232 MGGDGGGGVVRAVGSSLRMSVGSRGIEGESWRCDEGVFDHLRGMRREDEEEELKSVAIERLPTFERISKGMMKQDFHYWLFWVGLEIPKIEVRFEHLFVEGDAYTGTRAQPTLVNSTINAIEGVIGSIKLFPSKKRVVKILQDVNGILKPSRSSYRSSSPENSSLEPVFSSFTSALIKDNEQVSGRITYCGQELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYDQLLELLKREKQEGIKPDPEIDAFMKATAMAGQETSLVTDYILKILGLEACADTLVGDQMRRGISGGEKKRLTTGTRMHHWLLLQSHRFFRQLLAFFCVHQMSLSLFRFVAAIGRTEIVANTIGTFTLLIVFVLGGFIVAKDDIKPWMIWGYYASPMMYGQNAIVINEFLDKRWSAPNIDPRIPEPTVGKALLKTRGMFTEDYWYWISVGALLGFSLLFNICFIAALTFLSPFRDSKSIIVEEDDKMTNMNKSSPTKEQDMRTTEHGSASATNLFQGIEMVASNTIEDSSIPKTAESATTKRGMVLPFQPLSLAFDHVNYYIDMPTEMKNQGLEESRLQLLRDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYTEGSIRISGFPKNQATFARITGYCEQNDIHSPNVTVYESLVFSAWLRLGKEVKRETKKMFVDEVMELVELHPVKDFLVGLPGRDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFESFDELLLMKRGGQVIYSGPLGQHSLRLIEYFEAIPAVPKIKDGINPATWMLEISSPAVESQLGVDFAELYTKSELYQRNQELIKELSTPAPGAKNLYFPTKYSRSFITQWKACFWKQHLSYWRNPPYNSIRFFLAIAVGVIFGLIFWNEGDQIQKEQDLFNLIGAMYSAIFFLGCTNTSSVQPVVAIERTVFYRERAAGMYSALPYAFAQVAVELIYVAIQTLLYSLILFSMIGFTWRADKFFWFYYFVFMSFVYFTLYGMMTVALTPNYQIAAIVMSFFLSFWNLFSGFLIPRKQIPIWWRWYYWACPTAWTVYGLVTSQVGDKNNLVEVPGSTQISVKDYLEKHMGFEYGFLPVVAVAHIAFAILFLFVFAYGIKFINFQRR 1149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0661 1149 Pfam ABC-2 type transporter 873 1085 IPR013525 GO:0016020|GO:0140359
Glsi12g0661 1149 Pfam ABC-2 type transporter 319 404 IPR013525 GO:0016020|GO:0140359
Glsi12g0661 1149 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 548 801 IPR003439 GO:0005524
Glsi12g0661 1149 Pfam Plant PDR ABC transporter associated 417 475 IPR013581 -
Glsi12g0661 1149 Pfam ABC transporter 576 728 IPR003439 GO:0005524
Glsi12g0661 1149 Gene3D - 562 792 IPR027417 -
Glsi12g0661 1149 MobiDBLite consensus disorder prediction 483 502 - -
Glsi12g0661 1149 FunFam ABC transporter G family member 40 562 792 - -
Glsi12g0661 1149 SMART AAA_5 585 777 IPR003593 GO:0016887
Glsi12g0661 1149 Pfam ABC-2 type transporter 757 825 IPR043926 GO:0140359
Glsi12g0661 1149 Gene3D - 170 315 IPR027417 -
Glsi12g0661 1149 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 83 311 - -
Glsi12g0661 1149 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 571 786 IPR027417 -
Glsi12g0661 1149 CDD ABCG_PDR_domain2 545 783 IPR034003 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0661 Glsi-ChrGlsi12 22813713 22834351 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0661 573 760 Calmodulin-binding Proteins AT2G36910 26.977 9.94e-09 57.8