Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0659 ATGGCAACAGAATCATTGATAGAAGATAGTATTGTGAGGTCAGTGAGCGATGGAAAGAAGAAGGGTTTCATGTCACCCAGCAGAAACGGAATGGCCTCTGCAAGTCTCCTTGACTTGATGGGTTCACAGGGGATTGTGTTTCAGAGAAGTAGGAAGGATGATGATGAGGATGAGCTCAAGTGGGCAGCCATAGAAAGGCTTCCCACATATGATAGGATGAGGAAGGGGATTCTGATGCAGGTTTTGGATAATGGAAGGGTTAACTATGAAGAGGTTGACATCACCAAGCTTGGAATGGAGGAAAAGAAGCTTCTTATGGAGAATATACTAAAGACTGCTGAAGAAGATAATGAGAAGTTTCTCCATAAGCTAAGGGACAGGATTGATAGGGTTGCAATTGAGACTCCTAAGATTGAAGTCAGATTTGAGCATCTATCAGTTGAAGGGGATGCATATATTGGTACCAGGGCACTGCCAACGCTGCTGAATTCTACCCTGAATGCAGTAGAGGGATTTCTTGGATCAATCAAGCTTTTCCCATCTAAGAAAAGGGTTGTTAAGATCCTCAAAGATGTCAGTGGAATTGTTAAACCATCAAGAATGACTTTGCTTCTAGGGCCTCCAGGATCAGGGAAAACCACACTGCTGCAGGCACTAGCTGGGAAGTTGGAGAAGGATACAAGGACATCAGGAAGAGTCACTTACTGTGGTCACGAGTTATCAGAGTTTGTTCCTCAAAGAACATGTGCTTACATTAGCCAGCATGATCTTCATCACGGAGAGATGACAGTGAGGGAAACCTTGGATTTTTCTGGACGCTGCTTGGGTGTTGGAACAAGGTATGATCTGCTAGCAGAATTGTCAAGACGAGAAAAGGAAACAAGAATCAAACCAGATCCTGAGATTGATGCTTTCATGAAAGCCACAGCAATGGCAGGTCAAGAAACGAGTCTTGTCACAGATTATACTCTCAAGATTCTTGGATTGGAAATATGTGCTGATATTTTGGTGGGAGATGAAATGAGAAGGGGCATATCAGGTGGACAGAAGAAGCGTTTAACTACTGGTGAGATGCTGGTTGGACCAGCGAAAGTCCTCTTCATGGATGATATTTCCACTGGTTTGGATAGTTCCACAACCTTCCAAATTGTCAGGTTTTTCCGTCAATTATTGGCATTCTTCAGTGTGCATCAAATGGCTCTCTCTCTTTTTCGCTTCATTGCTGCAGTTGGGAGAACACAAGTTGTGGCAAACACACTTGGTACCTTCACATTGCTAATTGTTTTTGTCCTGGGTGGATTCATTGTTTCCAAAGATGACAGTGAGCCATGGATGATATGGGGATACTATGTTTCACCTATGATGTATGGACAGAATGCCATAACCATCAATGAATTCCTAGACGAAAGATGGAGCACCCCCAATAATGACACAAGAATTCTTCAACCCACAGTTGGGAAGGCTCTTCTCAAGGCCAGAGGACTATTTACAGAAGAATCTTGGTACTGGATATCTGTTGGTGCCCTCCTTGGCTTTTCTCTGCTTTTCAACATTCTATTCATTGTTGCTCTGACATATTTAAATCCCTTGGGAAATTCAAAATCTATTATTGTGGAAGAAGAAGACGAAAGTACAAGCATAACTTCATCATCTACAGAACAGAATTCAGCTTCAACAGATAAATTTGAAGGCACTAATATAGCAGTAAGAAATACCCCAGATCGCTCACTTCCTAAAGCAGAAGAGAGTGCAAGAACCAAGAAGGGAATGGTGTTGCCCTTCCAGCCCCTGTCACTTACTTTTGATCATGTCAATTACTACATCAATATGCCGACTGAAATGAAGAAACAAGGAATTGAAGAGAGTAGACTCCAACTACTAAGAGATATCAGTGGTGCTTTCAGGCCTGGAGTTTTAACAGCATTAGTAGGTGTAAGTGGCGCTGGAAAAACTACCTTGATGGATGTGCTTGCAGGAAGAAAAACTGGTGGTTATATTGAAGGAAGCATCAACATATCTGGCTACCCAAAGAACCAAGCAACTTTTGCTCGGATTAGTGGTTATTGTGAACAAAATGACATCCATTCTCCAAATGTTACAGTCTATGAATCTCTTGTTTTTTCTGCTCGGCTGCGCCTTGGTAAGGAGGTTAACAAAGAAACACGGAAGATGTTCATTGAGGAAGTTATGGAGATGGTTGAACTACAACCAGTGAAGAATTTTCTGGTAGGCCTTCCAGGAATAGATGGCTTATCAACTGAGCAGAGAAAGAGACTTACCATTGCTGTAGAATTGGTTGCCAATCCTTCCATTATCTTTATGGATGAGCCAACATCAGGTCTTGATGCTCGAGCTGCAGCAATTGTTATGCGTACAGTTAGAAATACAGTTGATACAGGGCGAACTGTTGTCTGCACAATTCATCAACCAAGCATTGACATATTTGAAGCTTTCGATGAGCTGCTTCTGATGAAGAGAGGAGGTCAAGTTATATATGGAGGTCCCCTTGGTCAACAGTCTCAGAAGCTTATAGAGTACTTTGAAGCTATTCCAGGAGTTCCTAAGATTAAAGATGGGTACAATCCTGCCACTTGGATGTTGGAGATCAGTGCACCAGTAGTTGAGGCTCAGCTTGGTGTAGATTTTGCAGAATTATACACTAATTCAGACTTGTGTCGAATCAATCAAGAACTTATTAAGGAGCTAAGCACACCAGTACCTGGAACAAAGGACCTTTATTTCCCAACCAAATATTCCCAATCCTTCATTGCTCAATGCAAAGCTTGCTTCTGGAAACAGCACTGGTCTTACTGGAGAAATCCACAGTATAACGCGGTCAGATTATTCATGACAATAATTGTTGGTGTCATGTTTGGACTTATATTCTGGAACAAAGGAGATAAAACAAATATGCAACAAGACCTATTGAATCTCCTAGGAGCTATGTATGCAGCTGTTATTTTCCTTGGAGCCATCAACACAAACTCTGTACAACCAGTTGTTGCAACAGAGAGAACAGTCTTCTACCGTGAAAGAGCAGCTGGAATGTACTCAGAACTGCCTTATGCAATCGCTCAGGTAGCAATAGAGATAATTTATGTTGCCATCCAAACTTTAGTCTATTCCGCTATCCTTTACTCGATGATTGGGTTCCAACCACAAGCTGACAAGTTCTTCTGGTTCTACTATTTTATCTTCATGTCCTTTGTCTACTTCACACTGTATGGAATGATGACTGTAGCTCTGACACCAAACCACCAAATTGCTGCAATCGTTATGTCTTTCTTTATCAGTTTCTGGAACCTGTTCTCTGGTTTTCTCATCCCACGAACGCAAATTCCAATATGGTGGAGGTGGTATTACTGGGCATCCCCAGTGGCTTGGACTATATATGGCCTGGTGACCTCCCAGGTGGGTGACAAGGATTCTCTAGTAGAGGTACCTGGAGAAAGACCTATATCAGTAAAAGCTTACCTTGAGAAGCAGATGGGGTTTCAATATGACTTCCTTGGAGCTGTTGCTATAGCCCACATTGCTTTTGCCATTCTCTTCCTTTTTGTGTTTGCCTACGGCATCAAGTTACTTAATTTCCAGAATAGATAA 3603 0.4208 MATESLIEDSIVRSVSDGKKKGFMSPSRNGMASASLLDLMGSQGIVFQRSRKDDDEDELKWAAIERLPTYDRMRKGILMQVLDNGRVNYEEVDITKLGMEEKKLLMENILKTAEEDNEKFLHKLRDRIDRVAIETPKIEVRFEHLSVEGDAYIGTRALPTLLNSTLNAVEGFLGSIKLFPSKKRVVKILKDVSGIVKPSRMTLLLGPPGSGKTTLLQALAGKLEKDTRTSGRVTYCGHELSEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRYDLLAELSRREKETRIKPDPEIDAFMKATAMAGQETSLVTDYTLKILGLEICADILVGDEMRRGISGGQKKRLTTGEMLVGPAKVLFMDDISTGLDSSTTFQIVRFFRQLLAFFSVHQMALSLFRFIAAVGRTQVVANTLGTFTLLIVFVLGGFIVSKDDSEPWMIWGYYVSPMMYGQNAITINEFLDERWSTPNNDTRILQPTVGKALLKARGLFTEESWYWISVGALLGFSLLFNILFIVALTYLNPLGNSKSIIVEEEDESTSITSSSTEQNSASTDKFEGTNIAVRNTPDRSLPKAEESARTKKGMVLPFQPLSLTFDHVNYYINMPTEMKKQGIEESRLQLLRDISGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSINISGYPKNQATFARISGYCEQNDIHSPNVTVYESLVFSARLRLGKEVNKETRKMFIEEVMEMVELQPVKNFLVGLPGIDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVIYGGPLGQQSQKLIEYFEAIPGVPKIKDGYNPATWMLEISAPVVEAQLGVDFAELYTNSDLCRINQELIKELSTPVPGTKDLYFPTKYSQSFIAQCKACFWKQHWSYWRNPQYNAVRLFMTIIVGVMFGLIFWNKGDKTNMQQDLLNLLGAMYAAVIFLGAINTNSVQPVVATERTVFYRERAAGMYSELPYAIAQVAIEIIYVAIQTLVYSAILYSMIGFQPQADKFFWFYYFIFMSFVYFTLYGMMTVALTPNHQIAAIVMSFFISFWNLFSGFLIPRTQIPIWWRWYYWASPVAWTIYGLVTSQVGDKDSLVEVPGERPISVKAYLEKQMGFQYDFLGAVAIAHIAFAILFLFVFAYGIKLLNFQNR 1200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0659 1200 FunFam ABC transporter G family member 34 176 407 - -
Glsi12g0659 1200 Pfam Plant PDR ABC transporter associated 471 537 IPR013581 -
Glsi12g0659 1200 Pfam ABC transporter 189 370 IPR003439 GO:0005524
Glsi12g0659 1200 Gene3D - 613 848 IPR027417 -
Glsi12g0659 1200 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 599 851 IPR003439 GO:0005524
Glsi12g0659 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 401 IPR027417 -
Glsi12g0659 1200 Pfam ABC-transporter N-terminal 113 163 IPR029481 -
Glsi12g0659 1200 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 623 835 IPR027417 -
Glsi12g0659 1200 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 43 390 - -
Glsi12g0659 1200 Pfam ABC-2 type transporter 925 1136 IPR013525 GO:0016020|GO:0140359
Glsi12g0659 1200 Pfam ABC-2 type transporter 378 466 IPR013525 GO:0016020|GO:0140359
Glsi12g0659 1200 FunFam ABC transporter G family member 40 613 843 - -
Glsi12g0659 1200 Gene3D - 176 419 IPR027417 -
Glsi12g0659 1200 CDD ABCG_PDR_domain2 596 834 IPR034003 -
Glsi12g0659 1200 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 173 457 IPR003439 GO:0005524
Glsi12g0659 1200 SMART AAA_5 636 828 IPR003593 GO:0016887
Glsi12g0659 1200 SMART AAA_5 198 433 IPR003593 GO:0016887
Glsi12g0659 1200 Pfam ABC-2 type transporter 808 877 IPR043926 GO:0140359
Glsi12g0659 1200 Pfam ABC transporter 627 779 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0659 Glsi-ChrGlsi12 22747248 22758063 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0659 624 811 Calmodulin-binding Proteins AT2G36910 27.228 6.52e-08 55.5