Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0610 ATGGGTGTGGGACTATCTGTATTGATAGGATTGAAAGCAGCTATGCTATTTATGTGCTTTGTATACCTTAGAAGCCTTGGTTTCATGTTGTTAACTTTTCCATTCTTGTATGCCTCTTTGGTATCTTTTCTGGTCTCGATTGCTTCTCACCCATCAATCGATCTTCCAATGCTTTTGGGGAAGAACCCAGATGGGAGCTTCCCCATTTGGTCATTGATCATGTTTAGCCCATATTTGTACTTTGTTAGACTTTTCTCTGCGTTGAGAAGATTGAGAAGTGGGGAAGCTCCTTACAGTGAAATTTCTGAGGGACTGTATGTTGGTGGGTGGCCATCTTCACCAGACAAATTGCCACCAGGAGACCCAGCCATTATTGATTGCACATGTGAATTGCCCAGAAAGTCAGAGTTCTCAGGGCTGGCATATCGCTGTATTCCAACTTGGGACACCAGAGCTCCTCAAGCTGCTGAAATAGAATCCGCTGTCAAGTGGGCTATTCGAAAGAGAGAGCTGAAAAGGCCCATTTTTATCCACTGTGCATATGGTCATGGAAGAAGTGTGACTGTTATGTGTGCACTGTTAGTGGCACTAGGTATTGCAGAAGATTGGAAAAATGCTGAGAAGTTGATCAAACAGAAACGACCTTGCATCCGAATGAATGCTCTCCATCGCAAGGTGCTCGAAGAGTGGTCCAAACACCGATTATCTGTGCCAAAGAAAAAAGGAGAGATCGGTGTGAGTTCCTTGAATCAATCTGACTCTTCTAGTCAATTACAGCATGAGGGTTTTCCAAATGGTAGTTGA 804 0.4378 MGVGLSVLIGLKAAMLFMCFVYLRSLGFMLLTFPFLYASLVSFLVSIASHPSIDLPMLLGKNPDGSFPIWSLIMFSPYLYFVRLFSALRRLRSGEAPYSEISEGLYVGGWPSSPDKLPPGDPAIIDCTCELPRKSEFSGLAYRCIPTWDTRAPQAAEIESAVKWAIRKRELKRPIFIHCAYGHGRSVTVMCALLVALGIAEDWKNAEKLIKQKRPCIRMNALHRKVLEEWSKHRLSVPKKKGEIGVSSLNQSDSSSQLQHEGFPNGS 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0610 267 CDD DSP_bac 97 232 - -
Glsi12g0610 267 MobiDBLite consensus disorder prediction 245 267 - -
Glsi12g0610 267 Pfam Dual specificity phosphatase, catalytic domain 123 232 IPR000340 GO:0008138|GO:0016311
Glsi12g0610 267 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 81 235 IPR029021 -
Glsi12g0610 267 Gene3D Protein tyrosine phosphatase superfamily 98 235 IPR029021 -
Glsi12g0610 267 PANTHER - 3 241 - -
Glsi12g0610 267 SMART dsp_5 97 233 IPR020422 GO:0006470|GO:0008138
Glsi12g0610 267 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 156 215 IPR000387 GO:0016311|GO:0016791
Glsi12g0610 267 MobiDBLite consensus disorder prediction 240 267 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0610 140 232 Protein tyrosine phosphatase (PTP) family AT5G56610 28.866 4.55e-06 44.3