Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0608 ATGGATCTAGTATTTACGGTTCTGGAAGTTGCTCTTTTATCTCCTCCTCTGCTGGCCATGGACACTTCAAATCCTGCAGCATTTGCAAATGCAGAGTTACTTCCCAATTACATAGGAAAGAAAGTACGAGCAGTGGTTCAAGTGCATCGATCTGATGGTGGGGTTGCTATTGGAAAATCCACAGATGATAGTCAGCTATCCGTGAGAGGGTTGCCACAAGTCCCTCCTATGAATTATATTGAGGTGATTGGTATTGCAGAGAGTAACCAATTGATTAATGCTGAAATATGGACTGACTTTGGCAGCACATTTGACGCCAACTCTTACAATCAGTTATGCCTCCTAGCAAATGGGGAATTCAAAAGTCTGTTTCTGTAA 378 0.4233 MDLVFTVLEVALLSPPLLAMDTSNPAAFANAELLPNYIGKKVRAVVQVHRSDGGVAIGKSTDDSQLSVRGLPQVPPMNYIEVIGIAESNQLINAEIWTDFGSTFDANSYNQLCLLANGEFKSLFL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0608 125 PANTHER REPLICATION PROTEIN A 14 KDA SUBUNIT A-RELATED 18 125 - -
Glsi12g0608 125 Gene3D - 20 125 IPR012340 -
Glsi12g0608 125 Pfam Replication factor A protein 3 20 119 IPR013970 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Glsi12g0608 125 CDD RPA3 25 124 - -
Glsi12g0608 125 SUPERFAMILY Nucleic acid-binding proteins 24 124 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0608 Glsi-ChrGlsi12 21905145 21907626 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0608 20 125 Core DNA Replication Machinery Family AT4G18590 63.208 5.24e-47 145