Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0595 ATGGAAGCTTCTAATGATATGATCTTTCGTTGTAGCGTCACTAACCAGGCACCTCAACCTGTAGATCCTCAACTCTATCAATACTACAACTCCACACACAAAAAGTATTTCAATGCCCATTTCTTCGTTCGCTTCACAGCAGATTTTGAAACTCTTTTGGACTCTACAATGATTCCACCATCACACTCTTCTCTATTCATATCTTGCCAAGAGTTCTTCCAACACGGCTCAACCATCCTACGAAGGAACCTTTCCCACCCTTTGGTTCCTCTTGAAGTGCTTGGCACGCTTACACCTCTAATGCTACGTGAGGCCATAAAAATCTTCATTTATAATCGTCACCCTCGTATCCACAATAACGCTTTTGCGGTATTTCCTTTGAGTTTGCATATGGTGGTCCAATTGCGAGATGTTGAGGGTGCTGTGATGGAATATGTCACACACCAATCCATGCAACAAGTGAGAATGGTTCCTGCGTCGGAAGAAGCCATTCGGTCGATAAACAAAGTGAAGCTCGAAAAAGAAATTGTTGATACCGAATCGTGCTGTATTTGCCTGAAAAATTTTGATGAGGGCGTGGAGATTTCGGCAATGGCGTGTCAACATATTTATCACAATGATTGTATTGTTCAGTGGCTAAAAACTAGTCATGTTTGTCCCTTGTGTCGATTCCCAGTGTCTGTTGCCAGCAACTCTTAG 699 0.4263 MEASNDMIFRCSVTNQAPQPVDPQLYQYYNSTHKKYFNAHFFVRFTADFETLLDSTMIPPSHSSLFISCQEFFQHGSTILRRNLSHPLVPLEVLGTLTPLMLREAIKIFIYNRHPRIHNNAFAVFPLSLHMVVQLRDVEGAVMEYVTHQSMQQVRMVPASEEAIRSINKVKLEKEIVDTESCCICLKNFDEGVEISAMACQHIYHNDCIVQWLKTSHVCPLCRFPVSVASNS 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0595 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 228 IPR013083 -
Glsi12g0595 232 ProSiteProfiles Zinc finger RING-type profile. 182 223 IPR001841 -
Glsi12g0595 232 Pfam Ring finger domain 181 223 IPR001841 -
Glsi12g0595 232 SUPERFAMILY RING/U-box 163 228 - -
Glsi12g0595 232 CDD RING-H2_PA-TM-RING 181 223 - -
Glsi12g0595 232 SMART ring_2 182 222 IPR001841 -
Glsi12g0595 232 PANTHER SI:CH211-59O9.10 74 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0595 Glsi-ChrGlsi12 21644579 21645277 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0595 149 226 C3H Transcription Factor Family AT1G18760 30.769 3.36e-14 67.8