Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0582 ATGGGCAAGAAAACACTTGGCCTCCCATCTCTCTTCAGAGCTCCAAGAAAGCATCCATGGCAGCTCCAGCTCTTGCCCTCTTGCGGGCACTCCACAAAAACCCTCTCGTTTCGAGGTGGGGATGACATTTTCAAGACTGTGAACTCCGTATTCTTCGACCCAATTGACCAGAGTCCCGTCATCGAAACCCCCGAGCCATGGTTCACGACGTCGTCGGAATCTGCAGGAAGCTTCTCGACGGAGTCAGAGGGAGAGTCTATGGAGTTGCTACTCCGTGGAGTGAGGTCGTCGGAGAGACTGTTCTTCGAGCCAGGGGACACGAGTTCAATTTTGAAAAAGGCGAAAGATGATGGATTTCCGTTTAAAGAAAGTGTAGTTTTAGCTATAGAATCGAATGATCCGTATGGGGATTTTAGGATATCAATGGAGGAGATGGTGGATTCTCATGGGTTGAGGGATTGGGAGGAATTGGAGGAGCTCTTGGGATGGTATTTGAAGGTGAATGAAAATAACAATCATAAATTTATAGTGGGAGCATTTGTAGATTTACTTGTTAGTTTGTCAGCTTCTTCTGACTATTCTTGTTCAGATTTTATTTCTACCTCTTATTCTTCTGCTGTTTCTTCCGTTTCATCTTGTTCCCCTCTTTGCCTATGTGAGGACCAGAATGAAATTGTTGACGAGCATGAAGATACAGAAAAGTCTTAG 708 0.452 MGKKTLGLPSLFRAPRKHPWQLQLLPSCGHSTKTLSFRGGDDIFKTVNSVFFDPIDQSPVIETPEPWFTTSSESAGSFSTESEGESMELLLRGVRSSERLFFEPGDTSSILKKAKDDGFPFKESVVLAIESNDPYGDFRISMEEMVDSHGLRDWEELEELLGWYLKVNENNNHKFIVGAFVDLLVSLSASSDYSCSDFISTSYSSAVSSVSSCSPLCLCEDQNEIVDEHEDTEKS 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0582 235 ProSiteProfiles OVATE domain profile. 127 186 IPR006458 -
Glsi12g0582 235 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 76 189 IPR038933 GO:0045892
Glsi12g0582 235 Pfam Transcriptional repressor, ovate 131 187 IPR006458 -
Glsi12g0582 235 NCBIfam uncharacterized plant-specific domain TIGR01568 125 188 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0582 Glsi-ChrGlsi12 21196095 21196802 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi12g0582 Ovate 2.5e-25 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi02g2557 02 75326682 75329133 Glsi12g0582 12 21196095 21196802 ECH
Glsi11g1166 11 7298337 7299092 Glsi12g0582 12 21196095 21196802 ECH
Glsi12g0582 12 21196095 21196802 Glsi12g0582 12 21196095 21196802 ECH