Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0578 ATGGGAATGGCAGCGGTGGGTGTTGATCCACTCAGTGAAAAAGCGGCCACGATGAGAGAGTCGCTTCAGAAGAGCCAGACTATCACAGACAACGTAGTTTCAATTCTGGGGTCCTTTGACCACCGTCTCTCCGCCCTTGAAACCGCCATGCGTCCAACCCAGATTAGAACGCATTCTATTCGGAAAGCTCATGAGAATATTGATAAGACATTGAAGGCTGCAGAAGTTATATTGGCTCACTTTGATCAATATCGTCAGGCAGAGGGCAAAATACTTAGAGGGCCACATGAAGACTTAGAGAGCTATCTTGAAGCAATTGATAAGCTGAGAAGCAACATTCAGTTTTTTGGAAATACGAAGGGCTTTAAGAGTGGTGATGGTGTTGTCAGTCATGCCAATAATTTGCTGGCTAAAGCTATTTCTAAGCTAGAAGACGAGTTTAGGCAGTTATTATTATCTTACAGCAAACCTGTGGAACCTGAGCGCCTCTTTGATTGCCTTCCAAACTCGATGCGACCTTCCTCTGGATCACCTGGTCATGAGGGTGATTCTAGTGGCAAGAATCCTTCTTCCAATAACCACTCTGACCCACAAAACAATAATACTGATGCTGTTGTGTATACACCTCCTGCTCTTATACCACCAAGGATTTTGCCACTTCTCCATGATCTAACCCATCAAATGGTTCAAGCTGGCCACCAACAGCAGTTACTCAGAATTTACAGGGATACCCGTTCTACTGTATTAGAAGAAAGCCTCCATAAACTGGGAGTTGAGAAACTCAGCAAGGATGATGTTCAAAAGCTACAATGGGAGGTTTTGGAGGCCAAAATTGGGAACTGGATTCATTTCATGCGTATAGCTGTCAAATTGTTGTTTGCTGGTGAGCGGAAAGTTTGTGATCAAATATTTGAAGGCTTTGATTCTCTTAGTGATCAGTGTTTTGCTGAGGTAACAACAAGCAGTGTCTCCATGCTACTTAGTTTTGGAGAAGCAATTGCCAGAAGCAAGAGATCACCAGAAAAGTTATTTGTGCTTTTGGACATGTATGAGATAATGCAAGAGCTCAATTCAGAGATTAAAACACTCTTCAAAGGTAAAGCATGCACTGAAATTAAAGAAGCTGCATTGGGTTTGACAAAACGGCTTGCACAAACAGCCCAGGAGACATTTGGTGATTTTGAAGAAGCAGTTGAGAAAGATGCTACAAAAACTGCTGTAACAGATGGAACTGTCCATCCTTTGACAAGCTATGTAATTAACTATGTGAAGTTTTTATTCGACTACCGGTCCACCTTGAAGCAACTTTTCCAAGAATTTGAAGGTGGAGATGATGCTTCACAGCTAGCATCTGTAACAATGCGAATAATGCAGGCTCTGCAAAACAATTTAGATGGAAAATCAAAGCAGTATAAAGACCCTGCTTTGACACATCTATTTCTAATGAACAATATTCATTATATCGTTAGATCAGTACGGAGGTCTGAAGCCAAGGATTTGTTGGGGGATGATTGGGTACAACGACATAGGAGGATTGTGCAGCAACATGCCAATCAATACAAAAGAAATGGATGGGCAAAGATTCTTCAGTGCCTCTCTATTTCGGGTCTGACCTCATCTGGTGGTGGTGGTAGTGGAGTAGGTGGAGATGGAGGAAGTAGTAGTAGTGGTGCTTCAAGAGCAATTGTTAAAGATAGGCTGAAGGCATTCAATATTATGTTCGAGGAACTTCATCAGAAACAATCTCAATGGGCAGTTCCTGATACAGAGTTGCGAGAGTCCCTTAGGCTTGCAGTTGCTGAAGTCTTGTTGCCTGCTTATAGATCATTTGTGAAACGTTTTGGGCCTATGGTGGAGAATGGAAAGAATCCTCAGAAGTACATCAAATACACAGCTGAAGATCTAGAGCGAATGTTGGGTGAATTTTTCGAAGGAAAAAACATGACCGAAACCAGGCGATAA 1962 0.423 MGMAAVGVDPLSEKAATMRESLQKSQTITDNVVSILGSFDHRLSALETAMRPTQIRTHSIRKAHENIDKTLKAAEVILAHFDQYRQAEGKILRGPHEDLESYLEAIDKLRSNIQFFGNTKGFKSGDGVVSHANNLLAKAISKLEDEFRQLLLSYSKPVEPERLFDCLPNSMRPSSGSPGHEGDSSGKNPSSNNHSDPQNNNTDAVVYTPPALIPPRILPLLHDLTHQMVQAGHQQQLLRIYRDTRSTVLEESLHKLGVEKLSKDDVQKLQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQIFEGFDSLSDQCFAEVTTSSVSMLLSFGEAIARSKRSPEKLFVLLDMYEIMQELNSEIKTLFKGKACTEIKEAALGLTKRLAQTAQETFGDFEEAVEKDATKTAVTDGTVHPLTSYVINYVKFLFDYRSTLKQLFQEFEGGDDASQLASVTMRIMQALQNNLDGKSKQYKDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNGWAKILQCLSISGLTSSGGGGSGVGGDGGSSSSGASRAIVKDRLKAFNIMFEELHQKQSQWAVPDTELRESLRLAVAEVLLPAYRSFVKRFGPMVENGKNPQKYIKYTAEDLERMLGEFFEGKNMTETRR 653
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0578 653 Gene3D Exocyst complex component Exo70 75 653 - -
Glsi12g0578 653 MobiDBLite consensus disorder prediction 170 206 - -
Glsi12g0578 653 Pfam Exo70 exocyst complex subunit 280 640 IPR046364 GO:0000145|GO:0005546|GO:0006887
Glsi12g0578 653 PANTHER EXOCYST COMPLEX PROTEIN EXO70 58 645 IPR004140 GO:0000145|GO:0006887
Glsi12g0578 653 MobiDBLite consensus disorder prediction 164 206 - -
Glsi12g0578 653 SUPERFAMILY Cullin repeat-like 77 644 IPR016159 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0578 Glsi-ChrGlsi12 21138654 21151156 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0578 8 653 EXO70 exocyst subunit family AT5G03540 75.186 0.0 998