Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0547 ATGGGAGTTTCTTCACAGCCTTGCATTGTTTCCCTGTCTCTGAAAGATCTGCTTCAGGGAACTGAAGAAAACATAAACGCATCGTATGGGTATTTGTGGAGCAAAGTATTGGCAGCCCAACGCATGAAGCGGAAGTTGTGCAAGAAAAGTGTCAAGAGCGGGACGCCAAGAAGGATTTTAATGAAGATGAGGGCACGCTTAATAGAAGGTTGCAAAAGACGAGCCATAGGGATTAAGACAAGGGTGAGAATATTGCAGAGGCTTGTACCCAACAGCGAGTCCATGGGGTCGGATGGACTCTTGAGAGAGACAGCTAAATACATTTTGTCATTGCAAATGAGAGTGAGAGTCATGCAGATTATGGTTAATGTATTGAGAGGTTCCGATGAGTGA 393 0.4478 MGVSSQPCIVSLSLKDLLQGTEENINASYGYLWSKVLAAQRMKRKLCKKSVKSGTPRRILMKMRARLIEGCKRRAIGIKTRVRILQRLVPNSESMGSDGLLRETAKYILSLQMRVRVMQIMVNVLRGSDE 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0547 130 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 33 125 IPR044660 GO:0006355
Glsi12g0547 130 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 62 111 IPR011598 GO:0046983
Glsi12g0547 130 CDD bHLH_AtIBH1_like 69 122 IPR044549 GO:0006355
Glsi12g0547 130 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 72 126 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0547 Glsi-ChrGlsi12 20095440 20095832 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0547 40 129 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 42.857 1.05e-13 60.8