Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0502 ATGGCTGTCTTCATGGCAATTCTGGGTTTGCTCTTGGTACTCTGTTTTTGCTCTGCTCTGTTGAGGTGGAATGAAGTAAGGTACAGGGAGAAAGGTTTGCCTCCAGGCACAATGGGGTGGCCAGTTTTTGGGGAGACGAGTGAGTTTCTTAAGCAAGGTCCAAACTTCATGAAAAATCAGAGAGCAAGGTTTGGCAGTTTTTTCAAATCCCACATACTGGGCTGTCCTACTATTGTGTCCATGGATCCAGAGCTTAATAGATACATCCTAATGAATGAGGCAAGAGGGCTTGTTCCTGGGTACCCTCAATCCATGTTAGATATCTTAGGCAAATGCAATATTGCAGCTGTTTATGGCTCCACCCACAAGTACATGAGAGGGGCACTGCTTTCCCTCATAAGCCCCACCATGATCAGAGATCAACTTTTGCCAAAAATTGATGAGTTCATGAGAACCCACCTGAGCAATTGGAATGACAAAGTCGTTAACATTCAAGAGAAAACCAAAGAGATGGCCTTTCTCTCATCTCTGAAGCAAATCGCAGGAATCGAATCAGGCTCAATAGCTCAACCATTCATGACAGAATTCTTCAAGCTAGTTTTAGGAACCCTCTCCCTGCCTATTGACCTTCCTGGCACAAATTATCGCCATGGAATTCAGTCAAGGAAGAACGTTATCAGCATTCTGAGTCAGCTACTAGAGGAAAGGAGAGCATCCCAAGAAATCCACCAAGACATGCTTGGTTGCTTGATGAGAAGTGGTGAAAATCGATACAAACTAACTGATGAAGAAATCATTGATCTAATAATAACAATTATGTATTCTGGGTATGAAACTGTTTCAACTACATCAATGATGGTAGTGAAGTACCTCCATGACCATCCCACCGTTCTTGAAGAACTCAGAAAGGAACATTTGGCCATAAGAGAAAAGAAAAGGCCAGAGGATCCAATTGACTGTAACGATCTCAAGTCGATGAGGTTGACTCGTGCGGTGATTTTTGAGACCTCGAGATTGGCTACAATAGTTAATGGGGTTCTTAGAAAGACCACTCAAGACATGGAACTAAACGGCTATTTAATTCCCAAAGGGTGGAGAATATACGTATATACAAGGGAGATCAATTATGATCCATTTCTCTATACTGAGCCACTAGCATTCAACCCATGGAGATGGCTGGATAAGAATCTAGAATCACAAAGCTACTTTCTAATATTTGGAGGGGGAACCAGGCAGTGTCCAGGGAAAGAATTGGGGATGGCAGAAATTTGTACTTTCTTACACTATTTCGTAACTAGATACAGGTGGGAAGAAGTAGGAGGAGATAAAATAATGAAATTTCCTAGAGTTGAAGCACCAAATGGACTGCACATAAGAGTGTCATCTAACTGA 1392 0.4217 MAVFMAILGLLLVLCFCSALLRWNEVRYREKGLPPGTMGWPVFGETSEFLKQGPNFMKNQRARFGSFFKSHILGCPTIVSMDPELNRYILMNEARGLVPGYPQSMLDILGKCNIAAVYGSTHKYMRGALLSLISPTMIRDQLLPKIDEFMRTHLSNWNDKVVNIQEKTKEMAFLSSLKQIAGIESGSIAQPFMTEFFKLVLGTLSLPIDLPGTNYRHGIQSRKNVISILSQLLEERRASQEIHQDMLGCLMRSGENRYKLTDEEIIDLIITIMYSGYETVSTTSMMVVKYLHDHPTVLEELRKEHLAIREKKRPEDPIDCNDLKSMRLTRAVIFETSRLATIVNGVLRKTTQDMELNGYLIPKGWRIYVYTREINYDPFLYTEPLAFNPWRWLDKNLESQSYFLIFGGGTRQCPGKELGMAEICTFLHYFVTRYRWEEVGGDKIMKFPRVEAPNGLHIRVSSN 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0502 463 PRINTS E-class P450 group I signature 403 413 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS E-class P450 group I signature 413 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS E-class P450 group I signature 370 394 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS E-class P450 group I signature 330 348 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS E-class P450 group I signature 61 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS E-class P450 group I signature 264 281 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 Gene3D Cytochrome P450 24 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 406 415 IPR017972 GO:0005506|GO:0016705
Glsi12g0502 463 PANTHER CYTOCHROME P450 26 31 441 - -
Glsi12g0502 463 Pfam Cytochrome P450 34 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 CDD CYP90-like 60 461 - -
Glsi12g0502 463 PRINTS P450 superfamily signature 404 413 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS P450 superfamily signature 275 292 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 PRINTS P450 superfamily signature 331 342 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Glsi12g0502 463 FunFam Cytochrome P450 85A1 24 462 - -
Glsi12g0502 463 SUPERFAMILY Cytochrome P450 27 449 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0502 Glsi-ChrGlsi12 16773645 16777269 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0502 81 461 Cytochrome P450 AT5G38970 68.848 0.0 563