Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0499 ATGGTTGGGGCTCAAACAACAGAGCAAGGAGATTGCTCCAAGTTCAAGGGCAACGTGCCTCATTGCTGCAAGAAAACTCCCACAGTGGTGGACTTACTTCCTGGGGTACCCTACAACCAGCAATTCACGAACTGCTGTAAAGGTGGAGTGGTGTCTGCCTGGGGTCCAGATCCTTCAGCCGCCGTCTCGTCCTTCCAGAACAGTCTCTGCTTAGGATATTCTGGATACAGAGATGCAAGCCTGCATGTGGATGGTTATTGGAACGCTCATTTTTGCACAGGTCCAGGCTATACTTGTGGCCCTGCAAAGGTCGTTCCTTCCACCACTTTCCTTACTCCTGACAAGCACCGCAAGACTCAAGCACTGAGGGTATTATGTTTGGAAAATCAAAGACCTGATTTTGAGGCAATGAGGCTTGTCCTCTCAGCTCTGTCTCTGCTTGTGCTGTTCTCTTATGATGCAGTTGCATATGATCCTTTGGATCCAACTGGGAACATAACGATCAAATGGGATGTCGTGTCTTGGACTGCAGATGGCTATGTGGCCGCGGTAGAAATGCACAACTTCCAAATGTTTCGGCACATTCTGAACCCAGGGTGGACCTTAGAATGGTCATGGGCCAAGAAAGAAGTCATATGGTCCATGGTAGGGGCTCAAACAACAGAGCAAGGAGATTGCTCCAAGTTCAAGGGCAATGTGCCTCATTGCTGCAAGAAAACTCCCACAGTGGTGGACTTACTTCCTGGGGTACCCTACAACCAGCAATTCACGAACTGCTGTAAAGGTGGAGTGGTGTCTGCCTGGGGTCAAGATCCTTCAGCCGCCGTCTCGTCCTTCCAGGTGAGCGTTGGGCAAGCTGGTACCTCAAACAAGACCGTTAAGCTTCCCCAGAATTTCACTCTCTTGGCCCCAGGTCCAGGCTATACTTGTGGCCCTGCAAAGGTCGTTCCTTCCACCACTTTCCTTACTCCTGACAAGCGCCGCAAAACTCAAGCACTTATGACATGGAACGTAACCTGCACTTACTCACAATTCCTGGCGAGAAAGAACCCAAGTTGTTGTGTGTCTTTGTCATCATTCTACAATGAAACAATTACGCCTTGTTCACATTGTGCCTGTGGCTGCCAGAACAAGAAGAACTGTGTCAAGAGTGACTCTAAAACTCTAAGTATGGTAGGTGTTCACACTCCAAAGAAAGACAATGAACCATTGCTGCAATGTACACATCATATGTGCCCAGTGAGGGTACACTGGCATGTGAAGCTCAACTATAAGGAGTACTGGCGAGTCAAGATCGCCATAACAAATTTCAATTACAGGATGAATTACTCCCTTTGGACTCTTGCTATCCAGCATCCAAATCTTAACAATATCACTCAAGTTTTTAGCTTTGATTACAAGCCTATAATGCCCTACCAATCCGTCAATGACACCGGTATGTTCTATGGTATGAAATACTATAATGATCTGTTAATGGAAGCTGGTCCAGCCGGGAATGTTCAATCAGAGGTGCTTCTTCGGAAAGACCAGAATACATTCACCTTCAAGCAGGGGTGGGCATTTCCTCACAAGGTCTATTTCAATGGTGATGAATGTATGCTGCCCCCACCTGATCGCTACCCATTCTTCCCTAACTCTGCCCCTGTAAAACTACTCTCCTTCTCAGCATTCATCTTCTCAATGCTTTTCCACCTATCTGCTTGGTGA 1707 0.4739 MVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVSAWGPDPSAAVSSFQNSLCLGYSGYRDASLHVDGYWNAHFCTGPGYTCGPAKVVPSTTFLTPDKHRKTQALRVLCLENQRPDFEAMRLVLSALSLLVLFSYDAVAYDPLDPTGNITIKWDVVSWTADGYVAAVEMHNFQMFRHILNPGWTLEWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPTVVDLLPGVPYNQQFTNCCKGGVVSAWGQDPSAAVSSFQVSVGQAGTSNKTVKLPQNFTLLAPGPGYTCGPAKVVPSTTFLTPDKRRKTQALMTWNVTCTYSQFLARKNPSCCVSLSSFYNETITPCSHCACGCQNKKNCVKSDSKTLSMVGVHTPKKDNEPLLQCTHHMCPVRVHWHVKLNYKEYWRVKIAITNFNYRMNYSLWTLAIQHPNLNNITQVFSFDYKPIMPYQSVNDTGMFYGMKYYNDLLMEAGPAGNVQSEVLLRKDQNTFTFKQGWAFPHKVYFNGDECMLPPPDRYPFFPNSAPVKLLSFSAFIFSMLFHLSAW 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0499 568 PANTHER PROTEIN COBRA 146 561 IPR006918 GO:0010215|GO:0016020
Glsi12g0499 568 Pfam COBRA-like protein 180 343 IPR006918 GO:0010215|GO:0016020
Glsi12g0499 568 Pfam COBRA-like protein 1 123 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0499 Glsi-ChrGlsi12 16554006 16569841 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0499 137 567 COBRA Gene Family AT3G29810 62.415 0.0 607