Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0498 ATGTTCTCCCTTCAACTTCCTCTTCAATTGGCTGATTTTGGGGTTTTACCTCGGAATGAGGCTAGTGGCGCCTTGAGTGGATTGACACGTGTTAGGAGATTTCAACAGTGGACTAATGCTAGAAGAGTATTGAAGGGAATTTCACTTGGGGTTCTAGTGATGGCTTTGGCTTACCTAACGGTTGTTAGGTTTGAGTCTAACGTTCCAGATCTTGAAGCAATGGCTGTGGACCAGAATAGGTGGCAGATACAGAGTGAACATAACACTTCAACGGTTCTGTATGAAGAGGGAGATGGGAATGATGTAGATTCCACGCATGGAGTGAGAGTCGCGGTCAACATCCGCCCCTTGATTACATCAGAGCTTCTACTTGGCTGCACAGATTGTATTTCTGTCCAAATTGGGTTGCATGCATTCACCTACGATTATGTTTATGGTAGTCGGGGGTTGCCTTCTTCTGCAATATACAATGATTGCGTAGCTCCACTTGTTGATGCCCTGTTCTGTGGGTATAATGCCACAGTTCTTGCATATGGCCAGATGGGATTTGGGAAAACATTCACAATGGGCACCAATTACCCCGGGGAAGGGAGTAGTGGTGGAATTATACCCCAGGTTATGGAAACTATTTTTAAGAGAATTGAGGCTCTGAAAGACTCCACAGTGTTTTCGGTGAGAGTATCATTTATTGAGATGTTCAAGGAAGAGGTTTTCGATTTACTTAATCCAAGTGGAGAAGAAGTGGCATCTATTGCAAAGCTGGCTGCACCTACCAGAGCTCCCATACGAATAAGAGAAACATTGAATAGAGGAATAACCCTAGCTGGTGTGACAGAGGCCGAAGTTAAGACAAAAGAAGAAATGGCAACATATCTCACACGTGGTTCATTGTCACGTGCCACTGGTAGTACAAATATGAACAATCAATCAAGTCGCTCACATGCTATTTTCACAATTACAATGGAGCAAAAGGGCGGTGATAATGTTTTATACGCAAAGCTCCATTTAGTGGACCTTGCTGGTTCTGAACGTGCAAAACTAATTGGTGCAAATTGCATGTGTTTAAAAGAAGGTATTCTTATCAACAAGGGTTTATTGGCTCTTGGGAATGTCGACAAGAAGCAAAAAGGAGGCCATGTGCCATATCGTGATAGTAAATTAACACGCCTGTTGCAGGATTCTCTTGGAGGAAACAGTAAAACGGTGATGATAGCATGTGTTAGTCCTGCTGACGCCTATGCTGAAGAGACGTTGAACACATTAAAGTATGCAAATCGTGCTCACAACATTCAAAACAAGGCAGTGATTAATCGTGATCCAGAGGCAGCTCAAGTGCAGAGAATGCGGAGTCAGATTGAGCAATTGCAGGCGGAGCTTCTATTTTACAGAGGTGATGCTAGTGGGCCATTTGAGGAACTTCAGGTTCTTAAGCACAAGATATCTTTACTTGAAGCAAGCAATGCAGAGTTACAGCGAGAGCTTCAAGAACGTCAAGTAGCCTGTGAGAGTTTAGCACAACGTGCTTTTGATATTCAGGTTCTTAAGAACAAGTTATCTTTACTCAAAGCAAGCAATGTAGAGTTACAGCGAGAGCTTCAAGAACGTGGAGTTCTTAAGGACAAGTTAGCTTTACTCGAAGCAAGCAACACAGAGTTGCAGCGAGAGCTTCAAGAACGTCGTGTAGCTTGTGAGAGTTTAGCACAACGTGCTTTTGATACTCAGTTCATGAAGGCATTTGCTCTACTCGTGGAGTTATTTTCATTCACGAGGACTTCAGAGTTCTCTGGCTGCGAGAGAGGATATGAAACAAAAAGAATTGAGGATTTCTGCTATTTCTTTCTCTGAAAAGAGTGTTCTAGCTCATTTGCATTATCTCGCATGTCATCTGCATACAAGTTGATTATGATTTATTCAAAAGCTTATGCGTCAAAAATCCATGATTTGGAAGGAGAATTGCTACGTTTAAAAAAATTGAACGACGCAAAAACCAGCTGGCTCAATGATAGGGTTGATGCAAATGAGGATGGATTCCGGTCAAAGAATGTATTATGTACATGCCATAACGAGTACTCTGATTGTGATGCTGTAGACGTATCAGGGGATAGTCATTTTAAATATTTGTACAACTTGTATGCAAATGACATGCGAGATAATGCAAATGAGCTAGAACACTCTTTTCTGCAAGAAAAGTTGGATAGAGAGCTTAAAGAACTGGATAAGAAACTTGAACAAAGGGAGCTAGAGAATTCTGAAGTCCTCGTGAATGAAAATAACTCCACGAGTAGAGCAAATGCCTTCATGAACTTACCACAGAATATGCAATCATAAGCTTATGATGCACTTGATCCAAATGGAAATATCACAATCAAATGGGATGTCATGAGCTGGACCCCTGATGGTTATGTTGCTGTTGTCACAATGAACAACTTTCAACAATATCGTCATATTGCAGCACCCATGTGGTCACTGGGATGGACATGGGCAAAGGAGGAGGTAATATGGAACATGATGGGAGGGCAGACCACTGAGCAAGGGGATTGTTCAAGTTTGAGGGTAAGGTGGGCACTCAGCTCATGGGCGCAGGATCCAATCAATGCAGTTGCTGCATTTCAGAAAACTCCTACTTGCTGTGTCTCCCTCTCGTCATTCTACAATGATACTATTGTACCCTGCCCAACATCTGGATGTGGCTGCCAGGGCAACTCATCTCAGTTTGTAGAGTCGGATTCACCGCATATCCAGTCAGTTGTCTCTGGCTCTGGAAAGAATATTATTAGGCCTTTGTTTCAATGCACTTGTCATATGTGCCCAGTCCGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGGGAAGATTATTATTGCGAATTTTAATTATAGGATGAATTATTCTGAATGGAACTTGGTAGTTCACCATACCAACTTGGACAATCTGACCCAACTTTTTAGTTTCAACTACAAGTCATTTGACTCCTTACGGAGCAATAAGTCAGTGAGATCTGGAATTATCGATGCTCTTGTTCAAAGGAATTTTTACTTTTATATTACAGACTGGAGCTACTGA 3075 0.4218 MFSLQLPLQLADFGVLPRNEASGALSGLTRVRRFQQWTNARRVLKGISLGVLVMALAYLTVVRFESNVPDLEAMAVDQNRWQIQSEHNTSTVLYEEGDGNDVDSTHGVRVAVNIRPLITSELLLGCTDCISVQIGLHAFTYDYVYGSRGLPSSAIYNDCVAPLVDALFCGYNATVLAYGQMGFGKTFTMGTNYPGEGSSGGIIPQVMETIFKRIEALKDSTVFSVRVSFIEMFKEEVFDLLNPSGEEVASIAKLAAPTRAPIRIRETLNRGITLAGVTEAEVKTKEEMATYLTRGSLSRATGSTNMNNQSSRSHAIFTITMEQKGGDNVLYAKLHLVDLAGSERAKLIGANCMCLKEGILINKGLLALGNVDKKQKGGHVPYRDSKLTRLLQDSLGGNSKTVMIACVSPADAYAEETLNTLKYANRAHNIQNKAVINRDPEAAQVQRMRSQIEQLQAELLFYRGDASGPFEELQVLKHKISLLEASNAELQRELQERQVACESLAQRAFDIQVLKNKLSLLKASNVELQRELQERGVLKDKLALLEASNTELQRELQERRVACESLAQRAFDTQFMKAFALLVELFSFTRTSEFSGCERGYETKRIEDFCYFFLXKECSSSFALSRMSSAYKLIMIYSKAYASKIHDLEGELLRLKKLNDAKTSWLNDRVDANEDGFRSKNVLCTCHNEYSDCDAVDVSGDSHFKYLYNLYANDMRDNANELEHSFLQEKLDRELKELDKKLEQRELENSEVLVNENNSTSRANAFMNLPQNMQSXAYDALDPNGNITIKWDVMSWTPDGYVAVVTMNNFQQYRHIAAPMWSLGWTWAKEEVIWNMMGGQTTEQGDCSSLRVRWALSSWAQDPINAVAAFQKTPTCCVSLSSFYNDTIVPCPTSGCGCQGNSSQFVESDSPHIQSVVSGSGKNIIRPLFQCTCHMCPVRVHWHVKLNYKEYWRGKIIIANFNYRMNYSEWNLVVHHTNLDNLTQLFSFNYKSFDSLRSNKSVRSGIIDALVQRNFYFYITDWSY 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0498 1024 ProSiteProfiles Kinesin motor domain profile. 107 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 108 463 IPR027417 -
Glsi12g0498 1024 Coils Coil 511 531 - -
Glsi12g0498 1024 SUPERFAMILY Class II aaRS and biotin synthetases 5 95 IPR045864 -
Glsi12g0498 1024 Coils Coil 535 569 - -
Glsi12g0498 1024 Gene3D Bira Bifunctional Protein; Domain 2 2 38 IPR045864 -
Glsi12g0498 1024 PRINTS Kinesin heavy chain signature 333 351 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 PRINTS Kinesin heavy chain signature 380 401 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 PRINTS Kinesin heavy chain signature 170 191 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 PRINTS Kinesin heavy chain signature 304 321 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 Pfam Kinesin motor domain 137 430 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 ProSitePatterns Kinesin motor domain signature. 332 343 IPR019821 GO:0003777|GO:0005524|GO:0007018
Glsi12g0498 1024 Gene3D Kinesin motor domain 98 459 IPR036961 -
Glsi12g0498 1024 SMART kinesin_4 105 438 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0498 1024 Coils Coil 473 507 - -
Glsi12g0498 1024 Pfam COBRA-like protein 801 875 IPR006918 GO:0010215|GO:0016020
Glsi12g0498 1024 CDD KISc_KIF4 108 431 - -
Glsi12g0498 1024 Coils Coil 445 465 - -
Glsi12g0498 1024 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 105 529 IPR027640 GO:0003777|GO:0007018
Glsi12g0498 1024 Coils Coil 724 755 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0498 Glsi-ChrGlsi12 16526410 16546251 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0498 777 994 COBRA Gene Family AT3G29810 40.439 1.93e-65 226