Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0494 ATGGTTGATTTTGGTGTTTTACATCAAAATAAGGCTAGTGGCTCCTTGAGTGGATTGACATGTGTCCAAATTAGGTCGTATGCATTCACCTTTGATTATGCCTATGGTAGTAAGGGGTTGCTTTATTCTGCAATATACGATGATTATGTAGCTCCGCTTGTTGATGCCCTGTTTCGTGGCTTGTTTAAAGAAGATGTGGCATCTACTATAAAGCTAACTATGCCTACCAGAATTCTCATACAAATAATAAGAGAAACAGTGAATGGAGGAATAACCCTTGGTGATGTGATAGAAGCCGAAGTTAAGACAAAAGAAGAAATGGCAACATATCTCACATGTGGTTCATTGTCATGTGCTACTGGCAGTACAAATATGAACAGTCAATCAAGTTGTTCACATGCTATTTTCACAATCACAATGGAGCAAATGGATGGTGATATTGTTTTATGCGCAGAGCTCCATTTAGTAAACCTTGCTAGTTTCGAACGTGCAAGGCTAACTGGTGCTGATTGGATGTGTTTAAAAGAAGGTATTCTTATCAACAAGGTTTTATTTGCTCTTGGGAATATGATAAGTGCCTTGAGAGATGACAACAAGCAAAAAGGAGGCCATGTATCATATCGTGATAGTAAATTAACATGCTTATTACTGATATTCAAGGAAGAGGTTTTTGATTTACTTAATCTAAACTTGTCTGGAGAAGATGTGGCATCTACTACAAAGCTGGCTGTGCCTACCAGAGTTCCCATACAAATAAGAGAAACAGTGAATGGAGGAATAACCCTTGGTGATGTGACAGAAGCCGAAGTTAAGACAAAAGAAGAAATGGCAACATATCTCACACGTGGTTCATTGTCATGTGTCACTGGCAGTACAAATATGAATAGTCAATCAAGTTTAGGTATTCTTATCAACAAGGGTTTGTTTGCTCTTGGGAATGTGATAAGTGCCTTGAGAGATGACAAGCGAAAAGGAGGCAATATGTCATATCGTGATAGTAAATTAACATGCCTATTGCAGAGACCCCTGTTAGACGTGGGTGAAAGGATGGGAAATGGTGCCAATGTTGAGAAAACAAACAGGGACCTCCAGGCATCAATCTTAAATGAGGAGCTGCCCCTATTGGACGTGGCTGAAGGGATGAAAAATGGTTTCAATGTTGAGAAAACAAGCAAGGACCGCCTTCTTGCTACTTAG 1197 0.3952 MVDFGVLHQNKASGSLSGLTCVQIRSYAFTFDYAYGSKGLLYSAIYDDYVAPLVDALFRGLFKEDVASTIKLTMPTRILIQIIRETVNGGITLGDVIEAEVKTKEEMATYLTCGSLSCATGSTNMNSQSSCSHAIFTITMEQMDGDIVLCAELHLVNLASFERARLTGADWMCLKEGILINKVLFALGNMISALRDDNKQKGGHVSYRDSKLTCLLLIFKEEVFDLLNLNLSGEDVASTTKLAVPTRVPIQIRETVNGGITLGDVTEAEVKTKEEMATYLTRGSLSCVTGSTNMNSQSSLGILINKGLFALGNVISALRDDKRKGGNMSYRDSKLTCLLQRPLLDVGERMGNGANVEKTNRDLQASILNEELPLLDVAEGMKNGFNVEKTSKDRLLAT 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0494 398 Gene3D Kinesin motor domain 303 367 IPR036961 -
Glsi12g0494 398 Gene3D Kinesin motor domain 79 216 IPR036961 -
Glsi12g0494 398 Pfam Kinesin motor domain 303 343 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 Pfam Kinesin motor domain 83 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 218 344 IPR027417 -
Glsi12g0494 398 ProSiteProfiles Kinesin motor domain profile. 1 216 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 24 216 IPR027417 -
Glsi12g0494 398 PRINTS Kinesin heavy chain signature 152 170 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 PRINTS Kinesin heavy chain signature 205 226 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 PRINTS Kinesin heavy chain signature 123 140 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Glsi12g0494 398 Gene3D Kinesin motor domain 217 302 IPR036961 -
Glsi12g0494 398 PANTHER CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED 218 299 IPR027640 GO:0003777|GO:0007018
Glsi12g0494 398 SMART kinesin_4 2 246 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0494 Glsi-ChrGlsi12 16461058 16467232 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0494 83 216 Calmodulin-binding Proteins AT5G65930 36.029 7.69e-14 71.6