Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0493 ATGGGATCCTGTTTGATACCCACGATTAGTTCCTTCCTCAAATCAAGTTCCTGCATTTTCTTTCTGTTTCTACTGTCTGGCACTTGCTTCACTTCCTCAGAAGCTTATGATGCGCTTGATCCAAATGGAAATATCACAATCAAATGGGATGTCATGAGTTGGACCCCTGATGGTTATGTTGCTGTTGTCACAATGAACAACTTTCAACAATATCGTCATATTGCAGCACCCGGGTGGTCACTGGGATGGACATGGGCAAAGAAGGAGGTAATATGGAACATGATGGGAGGGCAGACCACTGAGCAAGGGGATTGTTCTAAGTTTAAGGGTAACGTCCCACATTGCTGTAAAAAGGATCCAACAGTTGTAGATTTACTTCCAGGAACACCATACAATCTGCAAATTGCTAATTGCTGCAAAGGTGGGGTGCTCAGTTCATGGGCACAGGATCCAATCAATGCAGTTGCTGCATTTCAGGTAAGTGTTGGTAGGGCTGGAACCACAAACAAGACAGTCAAAGTGCCTAAAAACTTTACCCTCAAAGCACCAGGACCAGGTTACACTTGTGGGCCTGCAAAAATTGTGAAACCCACTCAATTTCTACAGGCAGACAAAAGGAGGGTGACCCAAGCGCTCATGACATGGAACGTGACATGCACATATTCACAATTTCTAGCTCAGAAAACTCCCACTTGTTGTGTCTCCCTCTCGTCGTTCTACAATGATACTGTTGTACCCTGTCCAACATGTGCATGTGGCTGCCAGGGCAACTCATCTCAGTGTGTAGAGCCGGATTCACCACATATCCAGTCAGTTGTTTCTGGCCCTGGAAAGAATATTATTACGCCTTTGGTTCAATGCACTAGTCATATGTGCCCAGTCAGAGTTCACTGGCATGTTAAGCTTAACTACAAGGAGTACTGGCGCGTGAAGATTACTATTACTAATTTTAATTATAGGATGAACTATTCTGAATGGAACTTGGTTGTTCAACATCCCAACTTGGACAATCTGACCCAACTTTTCAGTTTCAACTACAAGTCATTGACTCCTTATGGAGCAATAAATGATACAGCAATGCTTTGGGGAATTAAGTTCTACAATGATTTACTCACTCAAGCGGGCCCTTTTGGTAATGTACAGTCAGAGCTACTTTTCCGAAAGGATAAATCAACTTTTACTTTTGACAAGGGTTGGGCTTTTCCTCGGAGGATCTATTTCAACGGCGACAACTGTGTGATGCCACCACCAGATTCTTATCCATGGTTGCCTAATTCTGGTTCCCGGCAAGAGGTTTCCCTGCTTGCTTTACTGATGGGTCTCTTGGTAGCCTTGGTATATTATGCATATGTTTAA 1356 0.4366 MGSCLIPTISSFLKSSSCIFFLFLLSGTCFTSSEAYDALDPNGNITIKWDVMSWTPDGYVAVVTMNNFQQYRHIAAPGWSLGWTWAKKEVIWNMMGGQTTEQGDCSKFKGNVPHCCKKDPTVVDLLPGTPYNLQIANCCKGGVLSSWAQDPINAVAAFQVSVGRAGTTNKTVKVPKNFTLKAPGPGYTCGPAKIVKPTQFLQADKRRVTQALMTWNVTCTYSQFLAQKTPTCCVSLSSFYNDTVVPCPTCACGCQGNSSQCVEPDSPHIQSVVSGPGKNIITPLVQCTSHMCPVRVHWHVKLNYKEYWRVKITITNFNYRMNYSEWNLVVQHPNLDNLTQLFSFNYKSLTPYGAINDTAMLWGIKFYNDLLTQAGPFGNVQSELLFRKDKSTFTFDKGWAFPRRIYFNGDNCVMPPPDSYPWLPNSGSRQEVSLLALLMGLLVALVYYAYV 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0493 451 PIRSF COBRA 8 451 IPR006918 GO:0010215|GO:0016020
Glsi12g0493 451 Pfam COBRA-like protein 59 222 IPR006918 GO:0010215|GO:0016020
Glsi12g0493 451 PANTHER PROTEIN COBRA 25 440 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0493 Glsi-ChrGlsi12 16441565 16444858 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0493 12 449 COBRA Gene Family AT3G02210 75.391 0.0 715