Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0490 ATGGTTGCATCTGATGCACGAGTCAACTCGTTTGGTCAGGCCGAGATTAACTGGGACAAGCTAGACAAAACTAAGTTTTATGTCGTTGGAGCTGGACTCTTTACAGGTGTTACAGTGGCACTCTACCCAGTTTCTGTTGTGAAAACTAGACTGCAGGTTGTTTCCAAGGATTCTCTAGAGAGAAATGCGTTTTCTGTTATAAAAGGATTACTTAGAACAGATGGCATTCCTGGTCTATATAGAGGCTTTGGCACAGTCATCACTGGTGCAATTCCTGCCAGAATCATATTCCTTACTGCCCTAGAGACCACAAAGGTGGCTACCTTCAAAATTCTTGAACCATTTAGACTATCTGAAACTACCCAGGCAGCCTTAGCAAATGGAGTTGCGGGCATGACATCATCACTTATGGCTCAAGCGGTGTTTGTTCCAATTGATGTGGTTAGTCAAAAGCTGATGGTACAAGGATACTCAGGCCATGCTCAGTATAGTGGGGGACTGGATGTTGCTCGCAAGGTTTTAAGGTCTGATGGCATCAGGGGACTGTATAGAGGATTTGGTCTATCTGTTATGACTTATGCACCATCAAGTGCTGTATGGTGGGCAAGTTATGGTTCAAGTCAACGTTTCATTTGGAGATTCTTTGGACAAGGTGCTGAATATGACAAAGGCACTCCTAGTCTGCAGAAGATTATCTTAGTTCAGGCTACTGGTGGGATTATTGCTGGTGCAACTGCATCCTGTATTACAACCCCATTGGATACTATTAAGACACGATTACAGGTGATGGGACATGAAAAGAGAAGCACTGTGAAAAAGGTTGTTAAGGAATTAATCAATGAGGATGGTTGGAAAGGTTTATATAGAGGATTAGGTCCAAGATTTTTCAGCATGTCAGCATGGGGTACTTCTATGATATTGACTTATGAATATCTGAAGCGCTTGTGTGCAAAAGATGAATAG 963 0.4258 MVASDARVNSFGQAEINWDKLDKTKFYVVGAGLFTGVTVALYPVSVVKTRLQVVSKDSLERNAFSVIKGLLRTDGIPGLYRGFGTVITGAIPARIIFLTALETTKVATFKILEPFRLSETTQAALANGVAGMTSSLMAQAVFVPIDVVSQKLMVQGYSGHAQYSGGLDVARKVLRSDGIRGLYRGFGLSVMTYAPSSAVWWASYGSSQRFIWRFFGQGAEYDKGTPSLQKIILVQATGGIIAGATASCITTPLDTIKTRLQVMGHEKRSTVKKVVKELINEDGWKGLYRGLGPRFFSMSAWGTSMILTYEYLKRLCAKDE 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0490 320 Gene3D Mitochondrial carrier domain 26 320 IPR023395 -
Glsi12g0490 320 FunFam Mitochondrial substrate carrier family protein 27 319 - -
Glsi12g0490 320 Pfam Mitochondrial carrier protein 31 107 IPR018108 -
Glsi12g0490 320 Pfam Mitochondrial carrier protein 235 319 IPR018108 -
Glsi12g0490 320 Pfam Mitochondrial carrier protein 124 212 IPR018108 -
Glsi12g0490 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 23 107 IPR018108 -
Glsi12g0490 320 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 6 319 - -
Glsi12g0490 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 122 210 IPR018108 -
Glsi12g0490 320 PRINTS Mitochondrial carrier protein signature 39 53 IPR002067 GO:0055085
Glsi12g0490 320 PRINTS Mitochondrial carrier protein signature 183 201 IPR002067 GO:0055085
Glsi12g0490 320 PRINTS Mitochondrial carrier protein signature 239 261 IPR002067 GO:0055085
Glsi12g0490 320 ProSiteProfiles Solute carrier (Solcar) repeat profile. 230 315 IPR018108 -
Glsi12g0490 320 SUPERFAMILY Mitochondrial carrier 19 312 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0490 Glsi-ChrGlsi12 16408358 16426296 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0490 16 320 Chloroplast and Mitochondria Gene Families AT5G15640 76.547 4.06e-175 486