Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0487 ATGTCCAAGGCCCATGTTAGCACGGTGGTGAAGGGCAGCGTTGGTTATTTGGACCCAGAATATTACAAACGACAACGTTTGACTGAGAAGTCTGATGTGTACTCGTTTGGAGTGGTGTTGTTTGAGATATTGTGCGCGAGGCCAGCACTGATTCGTACGGGGGAGAAGAAGCAGGTGTCGCTAGCTGATTGGGCACGACATTGCTATCAAATTGGGACTCTGGTTCAGATTTTGGACCCAGCTTTGAAGGGTAAGATAGCACCCGAGTGTTTGAGGAAGTTTGGCGAGATTGCCGTGAGTTGTTTGCTTGATGATGGGACCCAACGACCATCCATGAACGATGTCGTTTGGGGACTGGAGTTTGCACTGCAGCTGCAAGAGAATGCTGAGCAGCGTGAGAAGCAGAAGAGTGGAAAGGAAGAGGATGAAGAAGGTAAGAGCTTCAATATTGAGTATAGTGATGACATGTTTAGTAGTGGCACTAGTGTTGGGCTAGTTTCGGAGTTCAATAAGAGCAGTGGAACAAGCATGACAAGCAGTGAGGGACAAAGTTATGGGAACAAAGAAACTGATAGGTTGATGTCTGCCACTGTTTTCTCTGAGATTATGGATCCAAAGGCACGATGA 627 0.4721 MSKAHVSTVVKGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEILCARPALIRTGEKKQVSLADWARHCYQIGTLVQILDPALKGKIAPECLRKFGEIAVSCLLDDGTQRPSMNDVVWGLEFALQLQENAEQREKQKSGKEEDEEGKSFNIEYSDDMFSSGTSVGLVSEFNKSSGTSMTSSEGQSYGNKETDRLMSATVFSEIMDPKAR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0487 208 MobiDBLite consensus disorder prediction 130 150 - -
Glsi12g0487 208 PANTHER OS07G0166700 PROTEIN 3 126 IPR045272 GO:0004714|GO:0006468
Glsi12g0487 208 Pfam Protein kinase domain 7 116 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0487 208 SUPERFAMILY Protein kinase-like (PK-like) 5 117 IPR011009 -
Glsi12g0487 208 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0487 208 Coils Coil 122 142 - -
Glsi12g0487 208 Gene3D Transferase(Phosphotransferase) domain 1 1 149 - -
Glsi12g0487 208 MobiDBLite consensus disorder prediction 168 191 - -
Glsi12g0487 208 MobiDBLite consensus disorder prediction 130 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0487 Glsi-ChrGlsi12 16371586 16372212 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0487 1 208 Receptor kinase-like Gene Family AT3G51550 55.607 8.03e-69 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0487 Pkinase 4.7e-09 CL0016