Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0483 ATGTCTAAGACCCACGTCAGCACGGTGGTGAGGGGGAGCGTTGGTTATCTGGACCCGGAATACTACAAACGTCAACGCTTAACGGAGAAGTCTGACGTGTACTCTTTCGGCGTAGTGCTGTTTGAGATTGTGGACCCAGCTTTGAAGGGTCAGATAGCGCCCGAGTGTTTGAAGAAGTTCGGGGAGATTGCCGTGAGTTGTTTGCTTGATGATGGGACCCAACGGCCGTCCATGAACGACGTGGTTTGGGGGTTGGAGTTTGCACTGCAGCTACAAGAGAATGCCGAGCAGCGTGAGAATATTGAAGATAGTGATGAGATGTTCAGTAGTAGCACTAGTCATGGGCTAATTTCTGAGTTTCAAAAAAGTAGTGAAGAGAGCCTGACAAGCAGTGAGGAACAAATTGATGGGAATAAGGAAACTGATAGGTTAATGTCTGCCACTGTTTTCTCTGAGATTATGGACCCAACGACACGATAA 480 0.4792 MSKTHVSTVVRGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEIVDPALKGQIAPECLKKFGEIAVSCLLDDGTQRPSMNDVVWGLEFALQLQENAEQRENIEDSDEMFSSSTSHGLISEFQKSSEESLTSSEEQIDGNKETDRLMSATVFSEIMDPTTR 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0483 159 Gene3D Transferase(Phosphotransferase) domain 1 1 115 - -
Glsi12g0483 159 Pfam Protein tyrosine and serine/threonine kinase 7 45 IPR001245 GO:0004672|GO:0006468
Glsi12g0483 159 PANTHER OS07G0166700 PROTEIN 42 92 IPR045272 GO:0004714|GO:0006468
Glsi12g0483 159 SUPERFAMILY Protein kinase-like (PK-like) 5 105 IPR011009 -
Glsi12g0483 159 MobiDBLite consensus disorder prediction 119 159 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0483 Glsi-ChrGlsi12 16284531 16285111 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0483 1 159 Receptor kinase-like Gene Family AT3G51550 43.478 2.37e-43 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0483 PK_Tyr_Ser-Thr 3.5e-07 CL0016