Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0478 ATGGCTGCCCCTCCACCCTTATCTTACTGCAACGACCCACAAAGTTATAGTCTCGCCGGACCCAACCCGGATCCTCCTCCGCCAACTCCGCCCAATTCTGATGAGCTACCTGGACAAAACCCGAAGAAAACCAGTAAAACGACCTTAATTGGCGTCGTCGCTGGTGTGGTTGCCGGCGTCGTTTTGCTATCCGCTCTTGTTGTTTTCTTCCTCGTCAGACGGGGGAAGAAGGTTAAGGATTCGAAGTCAAGCGATGGAACTTCGAAAGTTGGGCCCACGGGCATGTCTAAGACCCACGTCAGCACGGTGGTGAGGGGGAGCGTTGGTTATCTGGACCCGGAATACTACAAACGTCAACGCTTAACGGAGAAGTCTGACGTGTACTCCTTCGGCGTAGTGCTGTTTGAGGTATTATGTGGGATGCCACCTTTTATTCGTACAGTGGTGAAGAGACAGGTTTTGCTAGCTGATTGGGCCAAAAATCACTTTCAAATGGGGACACTGATTCAGATTGTGGACCCAGCTTTGAAGGGTAAGATAGCGCCCGAGTGTTTGAAGAAGTTCGGGGAGATTGCCGTGAGTTGTTTGCTTGATGATGGGACCCAACGGCCGTCCATGAACGACGTGGTTTGGGGGTTGGAGTTTGCACTGCAGCTACAAGAGAATGCCGAGCAGCGTGAGAATATTGAAGATGGTGATGAGATGTTCAGTAGTAGCACTAGTCATGGGCTAGTTTCTGAGTTTCAAAAAAGTAGTGAAGGGAGCCTGACAGGCAGTGAGGAACAAATTGATGGGAATAAGGAAACTGATAGGTTAATGTCTGCCACTGTTTTCTCTGAGATTATGGACCCAATGACACGATAA 864 0.4965 MAAPPPLSYCNDPQSYSLAGPNPDPPPPTPPNSDELPGQNPKKTSKTTLIGVVAGVVAGVVLLSALVVFFLVRRGKKVKDSKSSDGTSKVGPTGMSKTHVSTVVRGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEVLCGMPPFIRTVVKRQVLLADWAKNHFQMGTLIQIVDPALKGKIAPECLKKFGEIAVSCLLDDGTQRPSMNDVVWGLEFALQLQENAEQRENIEDGDEMFSSSTSHGLVSEFQKSSEGSLTGSEEQIDGNKETDRLMSATVFSEIMDPMTR 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0478 287 MobiDBLite consensus disorder prediction 247 270 - -
Glsi12g0478 287 MobiDBLite consensus disorder prediction 19 35 - -
Glsi12g0478 287 Pfam Protein kinase domain 100 210 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0478 287 SUPERFAMILY Protein kinase-like (PK-like) 93 211 IPR011009 -
Glsi12g0478 287 PANTHER OS07G0166700 PROTEIN 86 220 IPR045272 GO:0004714|GO:0006468
Glsi12g0478 287 MobiDBLite consensus disorder prediction 1 43 - -
Glsi12g0478 287 Gene3D Transferase(Phosphotransferase) domain 1 72 241 - -
Glsi12g0478 287 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0478 287 MobiDBLite consensus disorder prediction 247 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0478 Glsi-ChrGlsi12 16230071 16232854 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0478 39 287 Receptor kinase-like Gene Family AT3G51550 45.956 6.64e-61 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0478 Pkinase 3.1e-10 CL0016