Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0473 ATGGAACTTCGAAAGTTGGGCCCACGGGGGAGCGTTGGTTATCTGGACCCGGAATACTACAAACGTCAACGCTTAACGGAGAAGTCTGACGTGTACTCCTTCGGCGTAGTGCTGTTTGAGGTATTATGTGGGATGCCACCTTTTATTCGTACAGTGGTGAAGAGACAGGTTTTGCTAGCTGATTGGGCCAAAAATCACTTTCAAATGGGGACACTGATTCAGATTGTGGACCCAGCTTTGAAGGGTAAGATAGCGCCCGAGTGTTTGAAGAAGTTCGGGGAGATTGCCGTGAGTTGTTTGCTTGATGATGGGACCCAACGGCCGTCCATGAACGACGTGGTTTGGGGGTTGGAGTTTGCACTGCAGCTACAAGAGAATGCCGAGCAGCGTGAGAATATTGAAGATGGTGATGAGATGTTCAGTAGTAGCACTAGTCATGGGCTAGTTTCTGAGTTTCAAAAAAGTAGTGAAGGGAGCCTGACAGGCAGTGAGGAACAAATTGATGGGAATAAGGAAACTGATAGGTTAATGTCTGCCACTGTTTTCTCTGAGATTATGGACCCAATGACACGATAA 576 0.474 MELRKLGPRGSVGYLDPEYYKRQRLTEKSDVYSFGVVLFEVLCGMPPFIRTVVKRQVLLADWAKNHFQMGTLIQIVDPALKGKIAPECLKKFGEIAVSCLLDDGTQRPSMNDVVWGLEFALQLQENAEQRENIEDGDEMFSSSTSHGLVSEFQKSSEGSLTGSEEQIDGNKETDRLMSATVFSEIMDPMTR 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0473 191 ProSiteProfiles Protein kinase domain profile. 1 120 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0473 191 PANTHER OS07G0166700 PROTEIN 9 124 IPR045272 GO:0004714|GO:0006468
Glsi12g0473 191 MobiDBLite consensus disorder prediction 151 174 - -
Glsi12g0473 191 SUPERFAMILY Protein kinase-like (PK-like) 8 115 IPR011009 -
Glsi12g0473 191 Gene3D Transferase(Phosphotransferase) domain 1 3 146 - -
Glsi12g0473 191 MobiDBLite consensus disorder prediction 151 166 - -
Glsi12g0473 191 Pfam Protein tyrosine and serine/threonine kinase 11 114 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0473 Glsi-ChrGlsi12 16132878 16134017 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0473 9 191 Receptor kinase-like Gene Family AT3G51550 49.746 5.74e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0473 PK_Tyr_Ser-Thr 7.3e-10 CL0016