Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi12g0466 ATGGCACGTGGGACCCTTCGCGACCATCTTTTCGAATCTGATAACCGACCACTTTATTGGAAACAAAGACTAGAGATTTGCCTTGGTGCAGCGAGAGGACTGCATTATCTTCATACAGGTGCGAAGCACAATATCATACACCGCGACTCGAAGACAACGAACATTATAATAGACGAGAAATGGGTAGCGAAAGTTTCGGATTTCGGACTATCCAAAATAGGACCCACGGGGATGTCAAGAACTCACATAAGCACAGTAGTAAAAGGAAGAGTCGGGTATTTGGATCTGGACTACTACAAGCGTCAACGGTTGACTCAGAAGTCTGACGTGTACTCGTTGGGAGTGGTGCTGCTTGAGGATAGCATCAGGCCAGAGTGCTTAAAAGCTTTCGGTGATATGGCATTAAGTTGTTTGTTAGATGATGGGAATCAACGACCATCGATGGGTGATGTGGTGTGGAGCCTTGAGTTTGCGTTGGAGCTGCAAGAGAGCACAGAGAAAAGAAGGCTTCACGAGATCATTGAGGAAGAGAGAATACTATTGAGAAAGGGGAAGAATGCGGAAGAAGAAAGTGAAGTGCGATTTACGAGTAGTGAAGGAACTGGGAGTGAATCGAAGAGCAGCAAGATGACCATTTCTAGTAGTGAAGAGCAAGCTTTGGTTTCTGGGATGGTCTTCTCGGAGCTCAGGGACCCAGCGGTACGATGA 708 0.4661 MARGTLRDHLFESDNRPLYWKQRLEICLGAARGLHYLHTGAKHNIIHRDSKTTNIIIDEKWVAKVSDFGLSKIGPTGMSRTHISTVVKGRVGYLDLDYYKRQRLTQKSDVYSLGVVLLEDSIRPECLKAFGDMALSCLLDDGNQRPSMGDVVWSLEFALELQESTEKRRLHEIIEEERILLRKGKNAEEESEVRFTSSEGTGSESKSSKMTISSSEEQALVSGMVFSELRDPAVR 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi12g0466 235 MobiDBLite consensus disorder prediction 187 216 - -
Glsi12g0466 235 ProSiteProfiles Protein kinase domain profile. 1 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi12g0466 235 MobiDBLite consensus disorder prediction 196 216 - -
Glsi12g0466 235 Gene3D Transferase(Phosphotransferase) domain 1 1 180 - -
Glsi12g0466 235 SUPERFAMILY Protein kinase-like (PK-like) 1 174 IPR011009 -
Glsi12g0466 235 Pfam Protein tyrosine and serine/threonine kinase 1 119 IPR001245 GO:0004672|GO:0006468
Glsi12g0466 235 PANTHER OS07G0166700 PROTEIN 119 162 IPR045272 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi12g0466 Glsi-ChrGlsi12 15979990 15980820 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi12g0466 1 235 Receptor kinase-like Gene Family AT3G51550 46.127 1.16e-77 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi12g0466 PK_Tyr_Ser-Thr 4e-20 CL0016